| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2175 |
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| Symbol | |
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| ID | 6120146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2283728 |
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| End bp | 2284720 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641650113 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001776658 |
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| Protein GI | 170731225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC CATTTCGTTC CCAGTCAGAG TCTGTCGTGG AGTGTTTCAG CGTACGTATC
GTTGTCGTGC CTGCCGAGCA CAGTGGGCAG CGCTTGGATA ATTTTCTTCT CAGCAAACTA
AAGGGTGTCC CGCGCAGCTT GATTTACAAG CTGGTGCGCA GTGGGCAAGT CAGAGTGAAT
GGTGGTCGTG TCAAGGCCGA GCGCAAATTG GATGGGGGTG ACGAAGTCCG ACTTCCGCCG
CTACGTCTTA TTCAGGATCG GGCGATTGTC GCGCCATCGG CTGCATTTCT GGCCAGGATG
GAGGCGGCGA TTGTGTTCGA GGACGCGCGT TTGTTGGCGT TGAACAAACC CAGTGGTATG
GCTAGCCATG GCGGCAGTGG GGTCAGTTAC GGCGTGATTG AGGCTATGCG TATATTGCGT
CCTAAGCAGG AACTGGAACT TGTACATCGT TTGGATCGTG ATACCTCTGG TTTGTTGATC
ATGGCAAAAA AGCGTGCAGC TCTCATTGAG TTGCAGGCAT TGATGCGCGA AGCCAGCGTG
AATGGTAAGG AGGGGCGTGG TATTGCCAAG CGCTATTTGA CTCTGTTATC AGGGCGTATG
CCCAATGGAG TGATGAGTGT TGATGCGCCG TTGCATATTA ATTTGCGCCA TGGGGGAGAG
CGTCATGTCC GGGTGCATCA TGATGGGAAG CCTTCAAAGA GTCGTTTCCG TTTGCTAGAG
CGGCGTGGAG GGCAATCGTA TTGCGAGGTG TTGATCGAAA CTGGTCGAAC TCATCAGATT
CGTGTGCATG CACAGCATCT CGGTCATCCA GTTACTGGGG ACGACAAGTA CGGTGATCAG
GAAGTCAACC GGAAGTTGCG CGATCAGATT GGTTTACAGC GTCTTTTCTT ACATGCTGTG
TCGTTGGAGT TTGCTTTGGA TGCTGGAAGT ACGCCCTATG TGTTGAATGC TCCATTGGCG
GAGGACTTGG TGGCCGCCTT AGACCGTCTT TAG
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| Protein sequence | MTDPFRSQSE SVVECFSVRI VVVPAEHSGQ RLDNFLLSKL KGVPRSLIYK LVRSGQVRVN
GGRVKAERKL DGGDEVRLPP LRLIQDRAIV APSAAFLARM EAAIVFEDAR LLALNKPSGM
ASHGGSGVSY GVIEAMRILR PKQELELVHR LDRDTSGLLI MAKKRAALIE LQALMREASV
NGKEGRGIAK RYLTLLSGRM PNGVMSVDAP LHINLRHGGE RHVRVHHDGK PSKSRFRLLE
RRGGQSYCEV LIETGRTHQI RVHAQHLGHP VTGDDKYGDQ EVNRKLRDQI GLQRLFLHAV
SLEFALDAGS TPYVLNAPLA EDLVAALDRL
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