Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2150 |
Symbol | tsf |
ID | 6120120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2255768 |
End bp | 2256646 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641650090 |
Product | elongation factor Ts |
Protein accession | YP_001776636 |
Protein GI | 170731203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0274457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATCA CTGCATCCCT GGTCAAGGAA CTGCGCGAGC GCACCGGCGT AGGCATGATG GAGTGCAAAA AAGCGCTGAG TGAAAATGCA GGCAATATCG ACGCTGCTGT CGAATGGCTG CGTAAATCCG GTTTGGTAAA GGCCGATAAA AAGGCTGGTC GTATTGCTGC TGAGGGCCGC ATTGTGGTAG TTCATGATGG CGGTAAGGCT GTCCTGGTCG AGATCAATTC GGAGACCGAT TTTGTTGCCA AAGACAGTCA TTTTTTGGCA TTTGCCGAGG CTGTTGCGCA GGCTGCGTTA GTTGCTGGGG CGGTTGATGT CGAAGCCCTA AAGAGTGTCA AGCTTCCGTC TGGAGAGACT GTTGAGGAAG CTCGCGCTGC GGTGATTGCC AAGATTGGCG AGAATGTGCG GGTGCGTCGT CTGGCGCGGA TTGATAGTGC AAATAATGTG GCCGCATACG TACATGGTGG CCGTATCGGT GTATTGGTTG AAGTCAAGGG AGGCGATGTT GAGTTGGCTC GCGGTATTGC AATGCATGTA GCAGCGATGA ACCCCCCATA TAACAAGGTT GCTGATGTGT CGGCTGAATT TCTGGAAAAG GAAAAGGAGA TCGAGCTGAG TAAGATGTCT GAGAAAGACA AATCTAAGCC TGCCGATATT TTGGAGAAAA TTATCAGTGG GAAGATCAAC AAAATAGTTA AGGAAGTGAC TTTGTATGGT CAGCCGTATG TGCTTAATCC CGATCAAAGT GTCGAGCAAG TGGTGAAGGC CGCAGGTGCT GATGTGATTG GTTTCCAGCG CATGGAGGTT GGCGAAGGGA TTGAAAAGAT CGTCGAGGAC TATGCTTCTG AAGTGATGAA GCAGGCCGGC CTTTCTTGA
|
Protein sequence | MEITASLVKE LRERTGVGMM ECKKALSENA GNIDAAVEWL RKSGLVKADK KAGRIAAEGR IVVVHDGGKA VLVEINSETD FVAKDSHFLA FAEAVAQAAL VAGAVDVEAL KSVKLPSGET VEEARAAVIA KIGENVRVRR LARIDSANNV AAYVHGGRIG VLVEVKGGDV ELARGIAMHV AAMNPPYNKV ADVSAEFLEK EKEIELSKMS EKDKSKPADI LEKIISGKIN KIVKEVTLYG QPYVLNPDQS VEQVVKAAGA DVIGFQRMEV GEGIEKIVED YASEVMKQAG LS
|
| |