Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2112 |
Symbol | |
ID | 6120317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2212890 |
End bp | 2213330 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641650056 |
Product | fimbrial protein |
Protein accession | YP_001776602 |
Protein GI | 170731169 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AACAAGGCTT CACTTTGATC GAGCTGATGA TCGTCATTGC GATCATTGCC ATCCTGGCCG CGATCGCTCT GCCGATGTAT CAGAATTATG TCGCCAGGTC TCAAGTCGCA GCGGCGCTGG CCGAGATCAC ACCGGGCCGA ACACAAGCCG AAATCCGTAT GGCTGATGGA CAGGCTTCAA ACACTCCTAA CGCTATTGGA TTACGCACCC CGACCGCTCG TTGCAGCCTC GTTACGGTCG ACATCACAAC TACTGGCGGC ACAATCGTAT GTACGATGGT TGGTAATGGT CAGGTCAACA ATCAAACTAT CACCTTGACC CGCATCGCTG ATAACAACGC AGGCCAAGGT GGCGTCAATA CTGGGGGGAA CTGGACCTGT ACCACAACCG CGCCTGCAGC GTTAACTCCA GCAGGCTGCA CTGGAACCTA A
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Protein sequence | MKKQQGFTLI ELMIVIAIIA ILAAIALPMY QNYVARSQVA AALAEITPGR TQAEIRMADG QASNTPNAIG LRTPTARCSL VTVDITTTGG TIVCTMVGNG QVNNQTITLT RIADNNAGQG GVNTGGNWTC TTTAPAALTP AGCTGT
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