Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2099 |
Symbol | thrS |
ID | 6120304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2199882 |
End bp | 2201789 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641650045 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001776591 |
Protein GI | 170731158 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACGA TTACGCTCCC AGACGGCAGT CGCCGTGAAT TTGAAGGTCC CGTTAGCGTT ATGCAGGTTG CTCATGCAAT CGGTCCGGGC TTGGCCAAGG CCACCATTGC CGGGCAGATT GATGGGGGAC ACTTAGTGGA TGCGAGTGAT CTCATCGAGC ATGATGCTAT CCTGCGAATC ATCACTCCTG AGGATCAAGA AGCCCTGGAG ATCATCCGTC ACTCTTGTGC TCACTTGGTT GGCCATGCGG TCAAGCAGTT GTATCCCGAA GCCAAAATGG TTATTGGTCC AGTGATTGCT GATGGCTTTT ACTACGATAT TTACTCCAAG CGTCCGTTCA CCCCTGAAGA TTTGGCTGCG ATTGAACAGC GTATGGTCGA GTTGATTGCC CAGGACTACG ATGTGGTCAA ACACATCACT GCACGTCACG ATGTCGTGCG CTTGTTCAAA GAGCGTGGAG AGGATTACAA ACTGCGTCTC ATCGAAGATA TGGGGCCTGA AGTTACTGCG ATGGGGATTT ACCATCATCA AGAATATGTA GATATGTGCC GTGGCCCGCA CGTGCCGAAT ACGCGTTTCT TGAAGGCTTT CAGATTGACA CGCATTTCTG GTGCTTACTG GCGTGGTGAC ACAAAGAATG AGCAGTTGCA GCGCATCTAT GGCACTGCGT GGGCCGACAA GAAGCAACTT GAAGCCTATA TGCAACGGTT ACAGGATGCT GAAAAGCGAG ATCACCGCAA GATAGGTAAG GCGCAGGATT TATTCCACCT CCAGGAAGAA GGGCCAGGTT TGGTGTTCTG GCATCCGAAA GGCTGGGTGA TCTGGCAGAC AATCGAGAAT TACATCCGTC GTGTCTATCG CAACAGCGGC TATGGTGAAT TGCGTTGCCC GCAAATTTTG GATGTGTCGT TGTGGCAAAA GTCTGGTCAC TGGGATAATT ACAAAGAGAA CATGTTTTTT ACTGATTCGG AGAAGCGTAC CTACGCCGTT AAACCGATGA ATTGTCCTGG CCATGTTCAA GTGTTCAATC AGGGCTTACA TAGCTACCGT GATTTGCCGA TCCGCTATGG CGAATTCGGT GCTTGCCATC GTAATGAACC ATCCGGTGCG TTACATGGTC TGTTGCGTGT GCGTGGCTTC ACGCAGGATG ACGGCCACAT ATTCTGTACC GAGGCACAGA TTGAAGCCGA GGTCACGGCA TTCCACCGTC AAGCGTTGCA GGTCTATGCA GACTTTGGTT TCGAGAATAT TCAGATCAAA ATTGCCTTGC GTCCAGACAA GCGCCTAGGG GACTCCCTAA GTTGGGACAA AGCGGAGGCT GCGTTGCGTG CTGCTCTGAG TGCCTGTGAG GTGGAGTGGC AAGAGCTGCC TGGCGAAGGG GCGTTCTACG GTCCGAAGAT CGAATATCAT CTGAAAGACG CGATTGGCCG CACTTGGCAG TTGGGCACGA TCCAGGTTGA TTTCATGATG CCAGGTCGTC TCGGCGCAGA GTATGTAGAC GAGCGCAGCC AGCGCCGTCA CCCGGTCATG TTGCACCGGG CAATCGTGGG TTCGATGGAA CGTTTCATCG GTATTTTGAT TGAACACTAC GCTGGAATTT GGCCTACTTG GCTTGCGCCT GTCCAGGTAG TGATCGCTAA TATTACTGAT GCTCAGTATG AATATGCAGA GCAGGTCCAT AAAGCCCTTT TAAATCAAGG TTTCCGGGTC AACATTGATT TGCGGAATGA GAAAATCGGT TATAAGATTC GCGAACATAC ACTGCAACGC GTCCCTTACC TTTTGGTGGT TGGTGATCGT GAAAAGGAGA ATGGCACTGT TGCTGTACGC ACGTGTTCCA GAGAGGATTT GGGTGCTATG TCGATTTCTG CTTTCGTTGA GCGTTTGCAG ACAGAGCAAG TGGTGTGA
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Protein sequence | MITITLPDGS RREFEGPVSV MQVAHAIGPG LAKATIAGQI DGGHLVDASD LIEHDAILRI ITPEDQEALE IIRHSCAHLV GHAVKQLYPE AKMVIGPVIA DGFYYDIYSK RPFTPEDLAA IEQRMVELIA QDYDVVKHIT ARHDVVRLFK ERGEDYKLRL IEDMGPEVTA MGIYHHQEYV DMCRGPHVPN TRFLKAFRLT RISGAYWRGD TKNEQLQRIY GTAWADKKQL EAYMQRLQDA EKRDHRKIGK AQDLFHLQEE GPGLVFWHPK GWVIWQTIEN YIRRVYRNSG YGELRCPQIL DVSLWQKSGH WDNYKENMFF TDSEKRTYAV KPMNCPGHVQ VFNQGLHSYR DLPIRYGEFG ACHRNEPSGA LHGLLRVRGF TQDDGHIFCT EAQIEAEVTA FHRQALQVYA DFGFENIQIK IALRPDKRLG DSLSWDKAEA ALRAALSACE VEWQELPGEG AFYGPKIEYH LKDAIGRTWQ LGTIQVDFMM PGRLGAEYVD ERSQRRHPVM LHRAIVGSME RFIGILIEHY AGIWPTWLAP VQVVIANITD AQYEYAEQVH KALLNQGFRV NIDLRNEKIG YKIREHTLQR VPYLLVVGDR EKENGTVAVR TCSREDLGAM SISAFVERLQ TEQVV
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