| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2082 |
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| Symbol | |
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| ID | 6120286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2180327 |
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| End bp | 2181949 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641650028 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001776575 |
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| Protein GI | 170731142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.962694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAT CATTCCCCAT GATTCCGGTG AGTCTTCGAT TCCGATACGT TGCCTTGCTG
CTTGTGGCTA GTTTGGCGGT GCTGGTGCCG CGGCTGCATG CGGGTGAGGT CAATGCGATC
GAGTTGACCA GCAGCGCCAA TGGGACCCGC GCCGAAATCC GTCTTTCTGG TCGTGGTGCT
TTCAAGACAA TTTCGTTGTC TGCGCCAGAG CGTTTGGTGG TTGATTTCCC TGCTTCCAAT
GCCATTGAAT CCCTGAAGTT GCCTACAGGG CGTGGTGTGG TGCGTAGTGT GCGCACTGGC
CAGCCGGTGT CTGGAACGTT TCGTGTGGTC TTTGACTTAG CGAATCCTGT CGCTCCGCTC
AAACCGCAGA TGCAAGTGAT TGGCAATGTC TCCACGTTGG TGATTGAGTG GCCCGGCGGT
GTCAGTCACA CATCCACTGC GGCGGTTGTG CCGTCTGGGA GCCGTCTGGG AGCAGAGCCG
GACCCTGTGC CGACGGTGAT TGATTCACAT GCCGAGGCCG CGCGTGCTAC GGCGATGTTG
ACGGGCAAGG GACAACATAC CTTGGCGATG CCGGTTGCTC TTGGATTGGG CGAGTTGACC
ACGCATGGGG TGTCACCTGC TGACATTCTC AACGGAGCAT CGGTAGACGA TGCTCGATCT
GGGTCGGTAT CTGCTGCTGT CGCTACACCT GTGTCTGCGC TTGCATCCTC TGCTGCGACG
GGAGCTGTTA ACCCGTTGCC TGGCGGGACC GTTTCGTCGG TTGTGGATGT GAAAACTACC
CCGGCAGAAG ACACCGCATT GGTGACGACG GCTCCCGTAG TGCCTGGCAA TCTGTCGCGT
ATGCAGATGG CACCTGGTAT GCGCTCCTTG GTCGTGGCGA TTGATCCCGG TCACGGTGGC
CAGGATTCTG GTGCGGTTGG GCCTACCGGT AAACTTGAGA AAAACGTGAC GTTGGCGATT
GGGCGTGAGC TGGCGCGTCA GATCAATGCT ACTCCCGGGA TGAAGGCTTA CATGACGCGT
GATAGCGATG TGTTTATTCC ACTGCCCATG CGGGCGCAAA GAGCACGTGC GGCCAAGGCT
GATATTTTTA TTTCGATCCA TGCCGATGCT GCTGATAATC GTGCTGCCAC TGGTTCATCG
GTCTATGTGC TGTCGACGAG GGGTGCTTCC TCACAGCGTG CGCGTTGGTT GGCGGATAAG
GAAAACGCCG CCGATTTGGT CGGTGGGTTA CGTTTGCACA AGGCCGAGCC AACGTTGGCT
AACGTGTTAT TGGATTTGGC GCAGAGTGGT TATATGAAAG CCTCTGAAGA TGCTGCTGAT
CATGTGCTGG GCAGCTTGAA GCGGGTCGCC AATAACCATA AGTCGGAGGT GGAACACGCG
AATTTTGCGG TGCTGCGTAC CTCAGATATG CCAGCGATGC TTGTCGAGAC TGCCTTTATT
TCCAATGCAT ACGAGGAACG GCGTTTGGTT GATCCCGCCT TCCAGCGCCA ATTAGCTGCT
GCAGTGTTGG AGGGAGTGAT CACCTTTTTC ACCAATCAGC CGCCGCCCGG TACGTTGTTC
GCCTTGCGTG CACAAGCCGA GCCAGCTACG ACTGGTGGCT CGGTGAGCAC CAGCACGCGT
TAA
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| Protein sequence | MLESFPMIPV SLRFRYVALL LVASLAVLVP RLHAGEVNAI ELTSSANGTR AEIRLSGRGA
FKTISLSAPE RLVVDFPASN AIESLKLPTG RGVVRSVRTG QPVSGTFRVV FDLANPVAPL
KPQMQVIGNV STLVIEWPGG VSHTSTAAVV PSGSRLGAEP DPVPTVIDSH AEAARATAML
TGKGQHTLAM PVALGLGELT THGVSPADIL NGASVDDARS GSVSAAVATP VSALASSAAT
GAVNPLPGGT VSSVVDVKTT PAEDTALVTT APVVPGNLSR MQMAPGMRSL VVAIDPGHGG
QDSGAVGPTG KLEKNVTLAI GRELARQINA TPGMKAYMTR DSDVFIPLPM RAQRARAAKA
DIFISIHADA ADNRAATGSS VYVLSTRGAS SQRARWLADK ENAADLVGGL RLHKAEPTLA
NVLLDLAQSG YMKASEDAAD HVLGSLKRVA NNHKSEVEHA NFAVLRTSDM PAMLVETAFI
SNAYEERRLV DPAFQRQLAA AVLEGVITFF TNQPPPGTLF ALRAQAEPAT TGGSVSTSTR
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