Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2065 |
Symbol | |
ID | 6120269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2165308 |
End bp | 2167674 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641650014 |
Product | membrane protein |
Protein accession | YP_001776561 |
Protein GI | 170731128 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGATT GGATCTCTCG GTGTCGTATC GCTATTGCTG TGTTGTGGTT GTTGTTGTTA GTCGGTGTGG GCTGGTGGCT TGCGGATCGA CTGCAACTCA CGGGTGATCT GCGTCAGTTC ATGCCTGAGG CACAGACTCC CGCACAAAAG TTGTTACTTG AGGAGCTGGG TGAGGGGCCG GGTTCACGGT TGTTGTTGAT GTCGTTACGT GGGAGTGATC CAGCCATTTT GGCGCGGCAA TCGCAGGCAT TACGGGAAGT GTTGGCAGGG CAGCCTCAGG TGTTTGAGTT GGTTGCTAAT GGTGCGCAGG TTGGGTTGGA GGCAATTCCG GCCCGATTAT TGCCATACCG CTATCTGTTT AGTGACAGTT TTGATGCTGC GCCGCTGGAT GTTGGGTATC TCAAGCAGGC GTTGCAGATG CGGGTACAGG ATCTGGGGTC TCCAGCCGCG CGCGTGGTTG AGCCGCTGTT GCCTCGGGAT CCAACGTTGG AAGTGCTGCA TGTGGCTGAG CGTTTGCAGC CGTTAGCGGC ACCTGCAATG CGTGATGGGG TTTGGTTTGA TCGTGCTGGA CAGCGTGCGT TATTGCTGGC GCAGACGCAT GCCGCTGGTT TTGATCCCAC GGGCCAGCAG CGCGCTTACG ATGCGGTGCA GGCGGCGTTT ACTCGGGTCT CGGTGAATAC GGCAACGCAG TTGGAACTCA CGGGACCTGG TGCGTTTGCG GTGGAGATTG CTGCAAAGAC TCAAGGGGAG GCGCAGTGGA TCGGGATGTT GGATACGGTA GGACTGATTG TGCTGTTGCT GTTGGCGTAT CGCAGTTGGA AGGTGCCGTT GTTGGGGGTG TTACCTCTTG CCAGTGCTGG TCTGGCTGGT TTGGTTGCGG TGGCATTGCT GTTTGATCGT GTGCATGGCA TCACGGTGGC GTTTGGTTTT ACCTTGATTG GTGTGGTGCA GGATTATCCG ATTCACTTAT TTAGCCATCA ACGGCCGGGG CTGGACCCGC GGGAAAATGC GCGCCATTTG TGGCCGGCTT TGGCGACGGG TGTTGTTTCT ACCTGTATTG CTTACGTTAC GTTTCTATTT TCCGGGGTGG ATGGGCTACG TCAGCTTGCA ACTTTCACGA TTGCAGGGTT GTTGGTCGCG GCAGTGACCA CGCGTTGGTT GTTGCCGGGG TTGATTGATC CTGCGCCGCG TGATCCTGCC GATTCGGTCG TGCTCGCGCG GTTATGGCAG TGGACCGCGG GGGTGCGGTG TCCGCATTGG TCGCTAGCAT TATTGAGTGT GGCCGCAGTC GCTGCGGTGC TGCTGGTGCC TGGTCCGTTC TGGGAGAATG ATCTGTCCAA GTTGACTCCG GTACCGGTTG CTGCGTTGTT GCGTGATATG CGCTTGCGTC AGGAGTTGGG GGCGCCGGAT GTGCGCTATG TGCTGGCACT GCATGCGGTT TCGGCCGAGC AGGCGTTGCA AGCTGCTGAG GCGTTGCGCC CACGTCTGGA TGGTGCGGTT GCCCAGGGTA TTGTTGCCGG TTACGACATG GCGGCGCGTT ATTTGCCTAG CATCCAGACG CAGCGTCGGC GTCAACAGGC GTTACCCACG CCGGAGCAAG TGCGCCGTTT GGTCGCAGAG GCGGTGATCG CTTCGGGGTT TCGTGCTGAT GTATTTGAGC CATTTCAGGC GGATGTGGAG ATGGCACGGC AGGCACCGCC AATGACGATG CAGATGTTGG GAGGGACTGC GTTGGCGATG CCGGTCAGTG GTTTGTTGTT GGTGGGTACT GACGGTGTCA CCGCGCTGGT GTCGCTGATT GGTTTGCATG ATCCGCAGGC GCTCGCTGCC GTGGTAGGCG GTAGTGGTGC ACAGTTGATG GATTTGAAGG AGGCGTCTGA GTCACTGGTT GTGGCTTACC GTGGTCGTGT GCTGGCGGCG TTGGGTGTGG CTGGGGTTCT GTTGGTTGGC ACAGTGGCTT TGGCATTGCG TCAGTGGCGA CGGATGGTGC GTGTGCTCTT GCCTATGGCG ATGACAACGT TATGGATTGT GGCATTGCAA CGCATCTGTG GGGTGGAGCT GAATTTGTTT CACCTGATTG CGTTGATTCT TGCGGCTGGG TTGGGCCTGG ACTATGCGTT GTTCTTTGAA CACGCCGGTG ATCATCGCGC CGAGCAATTG CGCACGTTGC ATGCGTTGTT GGTGTGCAGT GTGATGACGT TGGTGGTGTT CGCTTTGTTG GCTGTCTCAA GTATTCCGGT GCTGAGTGCG ATTGGGAGTA CGGTGGCTCT GGGGGTGCTG CTTAACTTTG TTCTTGCGTT GTTGATCTCG CGTGTTCCGG TGTTGGAGAG GATTGCTGGG AGTGATGCTC GTGTCGCAAG GGGGTGA
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Protein sequence | MGDWISRCRI AIAVLWLLLL VGVGWWLADR LQLTGDLRQF MPEAQTPAQK LLLEELGEGP GSRLLLMSLR GSDPAILARQ SQALREVLAG QPQVFELVAN GAQVGLEAIP ARLLPYRYLF SDSFDAAPLD VGYLKQALQM RVQDLGSPAA RVVEPLLPRD PTLEVLHVAE RLQPLAAPAM RDGVWFDRAG QRALLLAQTH AAGFDPTGQQ RAYDAVQAAF TRVSVNTATQ LELTGPGAFA VEIAAKTQGE AQWIGMLDTV GLIVLLLLAY RSWKVPLLGV LPLASAGLAG LVAVALLFDR VHGITVAFGF TLIGVVQDYP IHLFSHQRPG LDPRENARHL WPALATGVVS TCIAYVTFLF SGVDGLRQLA TFTIAGLLVA AVTTRWLLPG LIDPAPRDPA DSVVLARLWQ WTAGVRCPHW SLALLSVAAV AAVLLVPGPF WENDLSKLTP VPVAALLRDM RLRQELGAPD VRYVLALHAV SAEQALQAAE ALRPRLDGAV AQGIVAGYDM AARYLPSIQT QRRRQQALPT PEQVRRLVAE AVIASGFRAD VFEPFQADVE MARQAPPMTM QMLGGTALAM PVSGLLLVGT DGVTALVSLI GLHDPQALAA VVGGSGAQLM DLKEASESLV VAYRGRVLAA LGVAGVLLVG TVALALRQWR RMVRVLLPMA MTTLWIVALQ RICGVELNLF HLIALILAAG LGLDYALFFE HAGDHRAEQL RTLHALLVCS VMTLVVFALL AVSSIPVLSA IGSTVALGVL LNFVLALLIS RVPVLERIAG SDARVARG
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