Gene Xfasm12_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2034 
Symbol 
ID6121117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2127836 
End bp2130724 
Gene Length2889 bp 
Protein Length962 aa 
Translation table11 
GC content54% 
IMG OID641649982 
Productzinc protease 
Protein accessionYP_001776530 
Protein GI170731097 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.554182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGCC CGCTTCCCCT GCTCATCATC GGTATTCTCG GTCTCGGAAC CGCCACTTTC 
ACACCCCGGG TCAGCGCGAC ATCGGGAACT CTGACGATTT CCAGCAAAGC CATTCCGAAA
CAAGACATTC CAGAGATCGC CTACGAGCGC TTCACCCTGC CCAATGGGTT GACGGTGATC
GTCCATGAGG ACCACAAAGC ACCCGTTATT GCCGTCAACG TGTGGTATCA CATCGGTTCG
GCAGACGAGC CTGCCGGGAA AACTGGGTTC GCACATCTGT TTGAGCATTT GATGTTCTCT
GGCTCGGAAA ATCACAAGGC CAGCTACTTT CAACCATTCG AGAAAATCGG TGCAACCGGG
ATGAATGGCA CCACGTGGTT TGACCGTACC AATTATTTCC AGACTGTACC GACGACTGCG
CTGGATATGG CGCTTTGGAT GGAATCAGAC CGTATGGGCC ATCTGCTTGG CGCAATCGGC
CAGAAGGAAT TGGATACGCA GCGTGGCGTG GTCAAAAATG AAAAACGCCA AAAAGAAAAC
GTGCCCTACG GACGGGTGAC CCAAAATATT CTGTCCAATC TCTTTCCAGC CAATCACCCA
TATCAGCACA GCACGATTGG TTCAATGGAG GATCTGGAGG CCGCTTCGCT GGCCGATGTA
AAAAGCTGGT TCCAAGCACA TTATGGTGCA GCCAATGCGA CCTTGGTGTT AGCCGGAGAC
ATCACGGTGG CCGAGGCACG CGACAAAGCG GCAAAGTATT TCGGCGATAT CCCCGCCGGC
CCTCCGGTGG CACACCAGCA CCCCTGGATC ACCCCGCTAC CGGCACAGAA GCGCGGTGTG
CAATACGATC GGGTATCGCA ACCACGGTTG TATCGCACCT GGATCACCCC AGAACTGGGA
AGCGATACTG TGGTGCAACT GGACTTGGCG ACAACTATTC TTGGTGGCAA CAAAACTTCC
CGTCTGTATC AGCGCTTGGT CTATAAGGAC AAGCTGGCTG ACAGCATATC GGCCAGTATT
TCTCCATTTG CGCTGGCCAG CCAAATGCAA ATCAACGCCG ATGTGAAACC TGGGATCGAT
CCTGCCAAGG TTGAAGTAGC GATTGCCGAG GAATTAAAAA AGTTTCTGGC CGAAGGCCCA
AGTGATGATG AATTGCAACG CGCTCAGATG AACTACCGCT CCGATCTGGT GCGCGGCCTG
GAGAGGGTCG GTAATAAGGC CGCGATCCTC GCTGCGGGAC AGCTTTATCT CAATGATCCA
GGTGCCTACA AGCTCGATCT ACAACGTGCT GCACAGGCCA CGCCCAACAG TGTCAAACAG
GCAGCAGCAA CATGGTTCAG CAAGGGGGAC TATCTGCTGA CCGTGTTACC AGTAGGCCCC
AATGTTGATC CAGCGACTGA GGATGCAAAG GTCACTGCGC GCCCCGCCGA ACCAGGCAAA
CCAGCAGCCA TGCTAGCGCC CAAAGTTCAT TACCACGTGA CAGCATCGCA GGTGGACCGC
CGCTCTGGGG TACCGGAAGT CACACAGTTC CCTTCTCTAA ATTTCCCTGC ATTGCAGCGC
AGTAAGCTGA AAAACGGCAT CGAAGTCATC TTGGCCGAAC GGCACACGAT TCCGGTAACC
CAAATCGTGC TGTTATTTGA CGCTGGCTAC GCAGCCGACC AAGACGCTAA ACCGGGTACG
GCAAACTTCA CCGCAACGTT GATGAACGAA AGCACGACTT CGTTGGACTC AGTCGAAGTG
TCACAGCAGC ATCAACGTCT GGGTGCCATC AGCAGTATTT CCTGCGATCT GGATTCCTGT
CGTGCTTCGC TGAACGCACT CAACGATCAA CTTATCCCAT CGCTGCACCT GTTCGCCGAT
CTGGTACGCA ATCCAGCCTT CAAGGCGACA GACATTGAAC GGATACGCGG CCAATGGCTG
GCCGCCATCG CGCAAGAGAA AACCCAGCCG CAGGGACTGG CTCTACGTAT TCTGCCGCCA
TTGTTATATG GGAAAGGGCA TCCTTACGGC ATCCCACTCA CCGGCAGCGG TACCAATGAA
GCGATCCAAA GTCTGACAGC TACAGACTTG AAAGATTTCC AGCAACGCTG GCTGCGCCCA
GACAATGTAC GCATCCTGGT GACCGGTCAT ACCACGCTTA AATCCATCAT CCCGCAGTTG
GAAGCCGCCT TTGGTGACTG GCAAGCTCCG AGCACGATCA AAAGCCACAA GCAGATTACC
GACGTGGCCG CACAGCTCAA ACCACGTATA TTCCTGATCC ATCGTCCAGA AGCGCAGCAG
TCATTGATTC TCGCCGGTCT GTTGGCTCCT CCGACGAAAG ATCCCGCTAA TCTGGAAATC
AATGTAGGTA ACGAGGCGTT CGGGGGCGGG GGCACCTTCA GTTCACGCCT GAACATGAAT
CTGCGCGAGG AAAAACATTG GGCTTATGGT GCACGTAGTG TGCTCCCCAA TGCACAGGGG
CAACGTCCTT ACGTGTTTAT CGCCCCCGTA CAAACCGACA AAACAGCCGA ATCCATCGCA
GAGATACAGA AAGAGGCACA AGACGTGATC GGTAACAAGC CGCTCACCCA AGAAGAAGTG
GAAAAGATCA AGCAACAGAT TATCCGTAGC CTGCCAGGCA GTTATGAAAC CAGCGGCGCA
GTGTTGGACG CAGTGGAAAG CATTGTCCGG TACGAACGCC CAGACAACTA CATACAGACT
CTCAAACCAC GCTTGGAAGC CATTGAGTCA ATCAGTGTAG AACGCGCCAT AAAACGCATC
ATCAATCCAA ATGCGATGAC CTGGGTCATC ATCGGTGACC TCAGCACCAT TGAGGCACCG
GTCCGCGCCC TGAAGCTGGC TGATGTGCAA GTCCTGGATA ACGACGGTAA CTCAGTCTCA
ACGCATTGA
 
Protein sequence
MLRPLPLLII GILGLGTATF TPRVSATSGT LTISSKAIPK QDIPEIAYER FTLPNGLTVI 
VHEDHKAPVI AVNVWYHIGS ADEPAGKTGF AHLFEHLMFS GSENHKASYF QPFEKIGATG
MNGTTWFDRT NYFQTVPTTA LDMALWMESD RMGHLLGAIG QKELDTQRGV VKNEKRQKEN
VPYGRVTQNI LSNLFPANHP YQHSTIGSME DLEAASLADV KSWFQAHYGA ANATLVLAGD
ITVAEARDKA AKYFGDIPAG PPVAHQHPWI TPLPAQKRGV QYDRVSQPRL YRTWITPELG
SDTVVQLDLA TTILGGNKTS RLYQRLVYKD KLADSISASI SPFALASQMQ INADVKPGID
PAKVEVAIAE ELKKFLAEGP SDDELQRAQM NYRSDLVRGL ERVGNKAAIL AAGQLYLNDP
GAYKLDLQRA AQATPNSVKQ AAATWFSKGD YLLTVLPVGP NVDPATEDAK VTARPAEPGK
PAAMLAPKVH YHVTASQVDR RSGVPEVTQF PSLNFPALQR SKLKNGIEVI LAERHTIPVT
QIVLLFDAGY AADQDAKPGT ANFTATLMNE STTSLDSVEV SQQHQRLGAI SSISCDLDSC
RASLNALNDQ LIPSLHLFAD LVRNPAFKAT DIERIRGQWL AAIAQEKTQP QGLALRILPP
LLYGKGHPYG IPLTGSGTNE AIQSLTATDL KDFQQRWLRP DNVRILVTGH TTLKSIIPQL
EAAFGDWQAP STIKSHKQIT DVAAQLKPRI FLIHRPEAQQ SLILAGLLAP PTKDPANLEI
NVGNEAFGGG GTFSSRLNMN LREEKHWAYG ARSVLPNAQG QRPYVFIAPV QTDKTAESIA
EIQKEAQDVI GNKPLTQEEV EKIKQQIIRS LPGSYETSGA VLDAVESIVR YERPDNYIQT
LKPRLEAIES ISVERAIKRI INPNAMTWVI IGDLSTIEAP VRALKLADVQ VLDNDGNSVS
TH