| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1946 |
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| Symbol | |
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| ID | 6120226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2023289 |
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| End bp | 2024182 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649900 |
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| Product | soluble lytic murein transglycosylase precursor |
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| Protein accession | YP_001776449 |
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| Protein GI | 170731016 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.378225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTC GCTTGCGTAT CGTTGGGGTG TTGTTGACCA TGATAGCGGT GCCTGCTTGG
GGGGCGGCGC TCTACAAGTG TTTGAATGTT GACGGTATAC CGAGTTATGT CAGTAAGCGT
GTTGCTGGTG CGACGTGTAC GGTTGTGGTT AATCATGTGT ATCGTGTTCC ATCGTTGGCT
GTGGCTGTTC CTGCTGCGGT GCCGGTTTCC GGGGCTGTGA AGGATGCTGT GGTTTCAGCA
CCCTCGGTTG GTGGTGCTGC AGTGATGTCA GCGCCGGTGC GTCCCGCTGT AGCTGGGGGG
GGGAAGCGTT TGGTTAGTGG GCAGGTTTAT TCTTATATTC AGGATGGGGT GCGTCACTAC
AGTAGCTCCG CTCCGAGGCA AACGGCCAGT GTGCATGGGT TGCGCACGAT TTCTTATAGT
TTCATCGAAA CTTGTTATGC CTGTGCGCCG AATCCTGGGG TCAATTTTGG TTCGGTGCCT
TTGAATACGT CTGCTTATCA TGGCGAAATC GTTTCCGCCG CAGGGGAGTT TGGGGTGGAG
GAGGCGTTGG TGCGTGCGAT TATTCATGCC GAATCTTCGT ATAACCCTCT TTCGTTGAGT
AGCGCCGGTG CGCAGGGGTT GATGCAGTTG ATGCCAGGGA CTGCGCGGCG TTTCGGGGTC
ACTGATTCCT ATGATCCGCT GCAAAATATC CGTGGTGGGG TGCAGTATTT GGCTTGGTTG
TTGAAGCGAT TTAACGGGAA TTTGACACTA GCAGCGGCTG GATATAATGC CGGTGAGGGT
GCGGTTGATC GTTACGGCGG TGTGCCACCG TATAGTGAGA CGCAGCGTTA TGTTGAGCGT
GTCAATGTGC TTCTTGGACG GTATCGTGCG GCGTTGATGA GTACACATCA ATGA
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| Protein sequence | MKSRLRIVGV LLTMIAVPAW GAALYKCLNV DGIPSYVSKR VAGATCTVVV NHVYRVPSLA
VAVPAAVPVS GAVKDAVVSA PSVGGAAVMS APVRPAVAGG GKRLVSGQVY SYIQDGVRHY
SSSAPRQTAS VHGLRTISYS FIETCYACAP NPGVNFGSVP LNTSAYHGEI VSAAGEFGVE
EALVRAIIHA ESSYNPLSLS SAGAQGLMQL MPGTARRFGV TDSYDPLQNI RGGVQYLAWL
LKRFNGNLTL AAAGYNAGEG AVDRYGGVPP YSETQRYVER VNVLLGRYRA ALMSTHQ
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