Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1935 |
Symbol | |
ID | 6120215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2015095 |
End bp | 2015724 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641649890 |
Product | hypothetical protein |
Protein accession | YP_001776439 |
Protein GI | 170731006 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTCA CTATTCACAC AGACAGCAAT CAAAGATCAT GGCAACTCAG TGCAGCTGAA AACAGCATGG CAACAACACT CACCCTCAGC GAAGCCGTCA CCGCACTACA ACAAGGCGGC GTGATCGCCT ATCCCACTGA AGCAGTCTGG GGGCTGGGCT GCGATCCACG TCAGGAAACG GCAGTACATA CCCTACTCAA TATCAAGCAA CGTGCATCCG GGAAAGGATT GATCCTGGTC ACGGCCGAAC TCAATACACT GCAAGATTGG CTAGATCTGG ACACGCTATC ACCAGAACGC CTGCATGAAG TCCAAGCCAG TTGGCCTGGT CCACATACCT GGGTCCTGCC AGCAAGCACA CGTGCCCCCC ATTGGATCAC CGGACACCAT AACGGCCTTG CTGTCCGAAT CAGTGCGCAC CCATTGGTCA GTGCACTCTG CCGTGCCTGG AACATGGCCC TTATCTCCAC CAGCGCCAAC GTGGCAGGGC AGTCGCCAGC ACGTCGCCGT GAAGATCTGG ATCCCTCACT GCTACCACAC TTGGCAGGCA TCGTAGACGG TCCAACCGGT GGCTTGGCCC AACCAACATC CATCCGTGAC GCACGCAGTG GACACATACT ACGGCTATAA
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Protein sequence | MPFTIHTDSN QRSWQLSAAE NSMATTLTLS EAVTALQQGG VIAYPTEAVW GLGCDPRQET AVHTLLNIKQ RASGKGLILV TAELNTLQDW LDLDTLSPER LHEVQASWPG PHTWVLPAST RAPHWITGHH NGLAVRISAH PLVSALCRAW NMALISTSAN VAGQSPARRR EDLDPSLLPH LAGIVDGPTG GLAQPTSIRD ARSGHILRL
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