Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1927 |
Symbol | |
ID | 6120207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2005753 |
End bp | 2007042 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641649882 |
Product | Sun protein |
Protein accession | YP_001776431 |
Protein GI | 170730998 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGATG GCATTGCACC GCGTGTGGTT GCGGCGCGGG TGCTAGCTTT GGTCGTGGAT CAGGGGCGTT CGCTCAAGAC GGAGCTGGCC GCAGCGTTGC CAACGTTGGA GGATGTGCGT GACCGTGCCT TGGTCGAGGC AATCTGTTTT GCAGTGTTGC GGCGGCGTCC GGTTTATGAG GCTGCGCTCA CCCGGTGGTT GGCGCGTCCC TTGGGTCGTG GTGATGCGCA GTTGCGCGGC TTGCTTATGG TTGGTTTTGC GCAACTTGAT GTTTTAAAAG TACCGCCGTA TGCGGCGTTG TCAGCGACGG TTGATGCCTG CCGCGTGCTG GGGTGGCCCC ACCGGGTCAG TTTTGTCAAT GCGGTGTTGC GTCGTGCTCA GCGTGAACGT TTGCCGGTCG TATCGTCTGA TGCTGCTTGG CCACGTTGGT TGGCAGAGCG CATCCGTGCT GACTGGGGGG AGCAGGCAGA AGCAATTTTT GATGCCAGCC TGAAGCCAGC GCCGATGTGG TTACGGGTCA ATCTGCGCTA TGGCGATCGT CACACCTATG TGCAGCGTTT GCAGGCAGCA GGTTTGGAGG CTGTACCAAG TGGATTGGTC CCTGAGGCGC TTGCGTTGGA TTGTTCTATG CCTGTATTGC AATTGCCCGG GTTCCAGGCC GGTGAAGTGT CGGTTCAAGA CTTGTCGGCG CAGCAAGTCG CTGCGTTGTT GTCACCAGCG CCACACGCCC GTCTGCTTGA TGCGTGTGCC GCGCCAGGCG GCAAAGCTGC GCATCTGTTA GAGCGTGCGC CCACACTGTG CTTGACTGCG TTGGATGTAG ATATGCAGCG GTTGCGTCGG GTTGCTGAGA CTTGTGACCG CATCCATGTC AAGGCTAGGT TGTGTGTTGC CGATGCGACT GATCTTGCGG CGTGGTGGGA TGGGGAGGCG TTTGATGCGG TGTTGTTGGA TGCGCCCTGC TCAGCGACTG GAGTGGTACG CCGCCAACCG GACGTGCTGC TCCACCGGCG TGCCGAGGAT CTATTGCCTT TATTAAATAT TCAGTCCCGA TTGCTGGATG CTTGTTGGCG CACCTTGCGC CCCGGAGGAG TACTGGTGTA TGTGACCTGT TCGGTGCTGC GTGCCGAGAA CCAGGCTCAG TTGGAAGCGT TTCTGGCCAG GACGGCCGAT GCCTGCGCCG AGGACCCTGG GGATGCGTAT GGTCAGCCCG CTGGTCTGGG GCGGCAGCGC TTGCCGGGTG AACAAGGCGG TGATGGCTTT TTTTATGCCA GGTTGATTAA AGACATATAA
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Protein sequence | MSDGIAPRVV AARVLALVVD QGRSLKTELA AALPTLEDVR DRALVEAICF AVLRRRPVYE AALTRWLARP LGRGDAQLRG LLMVGFAQLD VLKVPPYAAL SATVDACRVL GWPHRVSFVN AVLRRAQRER LPVVSSDAAW PRWLAERIRA DWGEQAEAIF DASLKPAPMW LRVNLRYGDR HTYVQRLQAA GLEAVPSGLV PEALALDCSM PVLQLPGFQA GEVSVQDLSA QQVAALLSPA PHARLLDACA APGGKAAHLL ERAPTLCLTA LDVDMQRLRR VAETCDRIHV KARLCVADAT DLAAWWDGEA FDAVLLDAPC SATGVVRRQP DVLLHRRAED LLPLLNIQSR LLDACWRTLR PGGVLVYVTC SVLRAENQAQ LEAFLARTAD ACAEDPGDAY GQPAGLGRQR LPGEQGGDGF FYARLIKDI
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