Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1910 |
Symbol | nrdR |
ID | 6120190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1989488 |
End bp | 1990033 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649867 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001776416 |
Protein GI | 170730983 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.658817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTGTC TGTTTTGCCA ACATACCGAT ACCCGAGTGA TTGATTCGCG CGTCTCCGAA GACGGTGCGA CAATCCGGCG TCGCCGCGAG TGTGAGGCGT GCGGTGAGCG TTTCAGTACG TTGGAAACGA TTGAGTTGAA GTTGCCGGTG ATCATCAAGA AGGATGGCGG GCGTGAGGCA TTTGATGGAC GCAAGCTGCG TACCAGTTTT GATCGGGCTC TACAGAAGCG TCCAGTGGCT GAGGAGCGCA TTGAGATGGC GATGCGTGCG GTGATCCACC GTCTGCGTAT GGCCGGTGAG CGTGAAGTGC CTTCAATCGT GGTGGGTGAA TGTGTTATGG CTGAGTTGCG TAAGCTCGAC CATGTGGGCT ATGTGCGTTT TGCTTCGGTC TATCGCAGTT TCCAGGATGT TGCCGATTTC CGCGAAGAGA TCGAAAAGCT TGAGAGCGAG TTACTGGTGA GTAGGGAGCA GTTGCCGTTG TTGGAAGCAG CAATGGAATC GATGGGACAC CCTTCTATTG ATCAGGGGGG TAAGCACGGT GCGTGA
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Protein sequence | MYCLFCQHTD TRVIDSRVSE DGATIRRRRE CEACGERFST LETIELKLPV IIKKDGGREA FDGRKLRTSF DRALQKRPVA EERIEMAMRA VIHRLRMAGE REVPSIVVGE CVMAELRKLD HVGYVRFASV YRSFQDVADF REEIEKLESE LLVSREQLPL LEAAMESMGH PSIDQGGKHG A
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