| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1878 |
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| Symbol | |
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| ID | 6121599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1958687 |
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| End bp | 1960072 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649839 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_001776389 |
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| Protein GI | 170730956 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.127884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACTC AATTGCCCGA CGCACTGATC ACTACTCTGT CCACTCTCCT GGGCTCGGAA
GGCTGGCGCC TTGATGCCAT CAGTCGCCGC CAGTACAGCG AAGACGACTC GCAGTGCTTT
TCCTGTGCCG ATGCAGTGGC GCTGCCACGT GACCTCAACG AGGTAGTGGC AATCGTACGT
GCCTGCCGTC AACATCGCGT GCCAGTGATC CCACGAGGTA CCGGGACTGG CACCGTGGGT
GGTGCAGTGC CGCTCCATGG CGGCATCGTT CTGTCATTGG CACGTATGAA CCGTATCGTC
GCGCTGCTGC CAGATGATCG CTGCGCAGTG GTACAGCCTG GGGTGATCAA CAATGACTTA
CAACAAGCAC TGGCACCACA TGGGCTTTTT TGGCCACCAG ATCCGTCCAG TACAGCGATG
TGCAGTATCG GCGGCAATCT TGCAACGAAT GCCGGTGGCC CGCGTACGGT GAAGTACGGT
GCCACACGAG ATAACGTACT TGGCGTCGTC GCAGTGACCG GTGTCGGCGA TGTGATCCGC
TGTGGCGGTG CTTATACGAA GAACGCCACC GGTTACGATC TGGCACATTT GTTGATTGGC
AGTGAAGGCA CATTAGCAAT CATCGTCGAA GCCACGCTAA AGCTGGCACC ACAACCACAA
GCTATCGCTG GCCTGCGTGC GTTCTATCAA GATACGGCCG CTGCCGCTGC CGCAGTGTCA
CGACTGATGT CACAACCGGC AATACCAGCA ACGCTGGAGT TCATGGACCA CAAAGCAATC
GAGCTGCTGT ATCGCAATGG CAGCAATATT CCTATGGCCG GCGCGATGCT GCTGATTGAA
GGAGACGGCA ATCACGACAC GCTTCCCTAT GTATTACAAG CACTGGCGCA AGCCGCTTCA
GGTGAAGGGC TGATGGACCT TGACGTGGCC ATGGATGGAG CCGCACGCGA TCAGCTATGG
GCGGCACGCA AGTCACTATC GCCAATGCTT CGCACGATTA AACCTGGAAA ACTAAACGAA
GACGTTGTTG TTCCCGTCTC GCGTATTCCT GATTTGGTTG CTGGCATAGA AGTATTGGCT
GCCGAGAGCG GATTACCCAT TGTCACATTT GGGCACGCCG GTAACGGAAA TCTACATGTG
AATATCATGT ATGACGATCA GGATGCGGAA GACATTATGC GGGCGCAGGC AACGCTACCA
AAGCTATTTA AGTTAGTTTT GACTCTTGGA GGCACCCTGT CAGGTGAGCA CGGGATTGGC
GTAGCCAAAC GTGACTTCAT GACACAAGCA TTCGACACAC CAACGCTAGC AGCAATGCGT
GCGATCAAGG CCGCATTCGA TCCAGACGGT ATTCTCAATC CAGGTAAAGT GCTACCCAGA
GTCTAA
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| Protein sequence | MDTQLPDALI TTLSTLLGSE GWRLDAISRR QYSEDDSQCF SCADAVALPR DLNEVVAIVR
ACRQHRVPVI PRGTGTGTVG GAVPLHGGIV LSLARMNRIV ALLPDDRCAV VQPGVINNDL
QQALAPHGLF WPPDPSSTAM CSIGGNLATN AGGPRTVKYG ATRDNVLGVV AVTGVGDVIR
CGGAYTKNAT GYDLAHLLIG SEGTLAIIVE ATLKLAPQPQ AIAGLRAFYQ DTAAAAAAVS
RLMSQPAIPA TLEFMDHKAI ELLYRNGSNI PMAGAMLLIE GDGNHDTLPY VLQALAQAAS
GEGLMDLDVA MDGAARDQLW AARKSLSPML RTIKPGKLNE DVVVPVSRIP DLVAGIEVLA
AESGLPIVTF GHAGNGNLHV NIMYDDQDAE DIMRAQATLP KLFKLVLTLG GTLSGEHGIG
VAKRDFMTQA FDTPTLAAMR AIKAAFDPDG ILNPGKVLPR V
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