| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1858 |
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| Symbol | |
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| ID | 6121579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1936325 |
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| End bp | 1936993 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641649822 |
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| Product | fimbrial assembly membrane protein |
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| Protein accession | YP_001776372 |
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| Protein GI | 170730939 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0178525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA ATTCGTTTAA ATTGAGTGAT CTAGATTTTA ATAATATTGG TGCATGGCCA
CAGAAGGTCA AGATGGTTTT CTGCGTCTTG GTCGGCTTTT TTATTGTCAT CATGGCTTGG
TTCCTCGTCA TTAGCGGTGA GCGTGAGAAA CTTAGTGTGC TTGAAGGCAA AGAGCGCGAG
CTGCGTTCGG AATTCCAAAA GCAGCAGGAA CGTGCTGTGA ACCTGCAGCC ATTAAAGCAA
CAGTTGGCGC AGATGGAAGA GGTGCTGAAG CAGATGTTGC GGCAGTTGCC TAGTAAGACC
GAAATGCCCG ATCTGATTGT TGACATCTCT CAGACTGCCT TATCTAGTGG TTTGGTGAAT
GAGCTATTTC AACCAGGGGA TGAAGTTCTT CAGGAGTTTT ACGCCGAGAA GCCGATTTCT
TTACGTATGG TTGGGAGCTA TCACCAGTTT GCTGCTTTTG TCAGTGGTGT GGCTTCTTTA
CCGCGCGTAG TGATTTTGAC TATGCATGAT ATGAGTCTCA AACCGAAAAC CAATAGGAAC
AATGTGTCTA CGCGAGGTTT GCTTGAATTG TCTGGCACAG TGAAAACCTA CCGCTACCTG
GATGACCAGG AAATAGTTAA TAAGGAGAAT CGTACTGCTG ATGTTGCGAG CAAGAAGGAT
GGACCATGA
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| Protein sequence | MSKNSFKLSD LDFNNIGAWP QKVKMVFCVL VGFFIVIMAW FLVISGEREK LSVLEGKERE
LRSEFQKQQE RAVNLQPLKQ QLAQMEEVLK QMLRQLPSKT EMPDLIVDIS QTALSSGLVN
ELFQPGDEVL QEFYAEKPIS LRMVGSYHQF AAFVSGVASL PRVVILTMHD MSLKPKTNRN
NVSTRGLLEL SGTVKTYRYL DDQEIVNKEN RTADVASKKD GP
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