| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1854 |
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| Symbol | |
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| ID | 6121575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1930077 |
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| End bp | 1931735 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641649818 |
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| Product | inner membrane protein |
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| Protein accession | YP_001776368 |
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| Protein GI | 170730935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.458981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CAACATTGGT TCTTGTGTTA CGGCGTCGGA TGAGTGACTT TAACTGGCGT
GTGTGCCCGG AAGTTTCTAC TGAGAGTGTA GTGCTCTGTA CTAGCCTGTT CTTTGCGCTT
GCTTGCAATA CGATGTTCTG GCGAAGTGCG ATGAGTACCG CCTCAGGAAG TATCAGTTTT
GTCCTTTCGC TTTTAACGTT GTTGGTGACG GTACATGCGT TGCTGTTGGG CTTGGTGGTG
TGGCGGTGGA GTGCAAAGCC ATTGTTGACT TTGTTATTCG TGATTACGGC GTTTGCTACG
TATTACATGA ATAGCTACAG CGTCTACCTG GACGCGGACA TGCTGCGTAA TGTGTTCAAT
ACCGATCATA AAGAGTCTCG GGAGCTGATA ACTTCAGCGC TAATTTTGCC GTTGCTGTTC
TATGCGGGAG TACCAATTGC GGTGTTGTGG CGGCTACGGT TTCGCCAGCG ACCTTGGTCT
CGTGCGCTTG GCCTACGCAT GTTGTTTTTG CTGATAGTTA TTGTGGTTGG TGCCAGTGGT
GCGATGCTGT CATTCCAAAA ATTGTCGGCG TTGATACGTA ATGATCGTGA GGTGCGTCAT
TTAGCCACGC CCATCAATTA CATCATGGCG TTGCGCAAGA TGTTGAGCAA TGATTCGGCT
TTGAAACGCG CTCCCAAGTT GCCGATTGGT GAAGATGCGG TGGCTACCCC ACGTGTACCA
AGTAGTCGTC CGCGCTTGTT AGTAATCGTA GTTGGTGAAA CTGCCAGGGC GCAGAATTGG
GGGCTGAATG GCTACGTCCG TCAGACAACT CCGCAATTGG CTCAGAACGA CGTTATCAAT
TTCCCAGATA TGCACTCGTG TGGAACTAAT ACTGAAGTTT CGGTGCCATG CATGTTTTCA
CCGTATGGTC GTCGCAATTA TGACGAACGT AAAATTCGTG GGCATCAGTC GCTATTACAT
GTGCTTGAGC GTGCCAGAAT CAGTACGTTG TGGCGCGATA ACCAGTCTGG CTGTAAGGGG
GTATGTGATG GATTGGAGTT GCAGCAGTTA GATGATGCTA AAGATCCCAC GCTGTGTACT
AGTAGTGGTC GCTGTATGGA TGAAATTCTA CTGAAGGATT TCGTGTCGCA GGTACGCAGT
AAGTCGGGGG ATCGGGTGGT GGTGCTTCAT CAGCTTGGTA GCCACGGTCC CAGTTATTTC
CAGCGTTATC CAGTTGCGTT CCGTCAATTT AATCCGACGT GTGAGACTCC TAACCTGGGG
AGTTGCAGCC GTGAGCAGGT CGTTGCTGCT TACGATAATA GTTTGCTTTA TACCGATCAC
TTTCTTGTCC GGACGATTGG GATGTTGCGT GATATGTCCG ACTACGACAC AGCGATGATT
TATTTATCCG ATCACGGTGA ATCTCTTGGT GAAAAGGGAC TTTATTTGCA TGGGATGCCA
TACGCAATTG CGCCTGTTGA GCAGACACGG GTTCCGATGG TGATATGGTT CTCGAAGCAG
TTCGTTCAGT CACGTCAGAT AGACTTGAAC TGTGTGCACC AACGTGCTCG TCAGTATGCT
GACCATGACA ATCTATTCTC ATCGGTGTTG GGGTTGATGC AGGTCAGGAC AGCTCTATAT
GAGCGTCCAC ATGATCTGTT TGCCACATGC GAGAAATGA
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| Protein sequence | MSFSTLVLVL RRRMSDFNWR VCPEVSTESV VLCTSLFFAL ACNTMFWRSA MSTASGSISF
VLSLLTLLVT VHALLLGLVV WRWSAKPLLT LLFVITAFAT YYMNSYSVYL DADMLRNVFN
TDHKESRELI TSALILPLLF YAGVPIAVLW RLRFRQRPWS RALGLRMLFL LIVIVVGASG
AMLSFQKLSA LIRNDREVRH LATPINYIMA LRKMLSNDSA LKRAPKLPIG EDAVATPRVP
SSRPRLLVIV VGETARAQNW GLNGYVRQTT PQLAQNDVIN FPDMHSCGTN TEVSVPCMFS
PYGRRNYDER KIRGHQSLLH VLERARISTL WRDNQSGCKG VCDGLELQQL DDAKDPTLCT
SSGRCMDEIL LKDFVSQVRS KSGDRVVVLH QLGSHGPSYF QRYPVAFRQF NPTCETPNLG
SCSREQVVAA YDNSLLYTDH FLVRTIGMLR DMSDYDTAMI YLSDHGESLG EKGLYLHGMP
YAIAPVEQTR VPMVIWFSKQ FVQSRQIDLN CVHQRARQYA DHDNLFSSVL GLMQVRTALY
ERPHDLFATC EK
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