| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1715 |
|---|
| Symbol | |
|---|
| ID | 6121674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1785552 |
|---|
| End bp | 1786658 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649693 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001776246 |
|---|
| Protein GI | 170730813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0351551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CGGAGCAAGC CTACAAAGGC ACCTTACTAT CTAACACTGA CTCATTACCC
GTCGGCCATT ATTTCACGCT GCGTATGACC TCATCCAACT TCTCTGATAC CACACGTGCG
ACACAACGCC TGCAATGGAT CCGTACCACA CTCGCAGACT CGACAGCAAC GCTACAACGT
GCTTCCAGTG ACGCCGGATT CCGCAGTTAT TGGCGCAGCA CTAGCAACGG CCTTAGCCAT
ATTCTGATGG ACGCCCCACC ACATCTAGAA AATCCACACC AATGGCTACG TATACATGCA
CTACTCACCA GCGGTGGCGT GCGTGTCCCA CACATACTGA CACAAGACCT TGAAGCTGGC
TTCTTACTGC TAGAGGACCT CGGCATACCA ACGCTGGCCC AACGCCTGGA CGCCGACAAC
GCCGACGCCC TATTCGACGC CGCACTGGAC CAACTGATCG CGTTGCAGTG CATTGTTCCG
CCAAACGACC TTCCCCGGTT CAACACAGCA CTACTAGAAC GCGACGCCAG CTTGTTCGAA
GACTGGTTCC TATACCGCCA CCTGAACTTA ACATTGAATC GCACAGACCT CGACGCACTG
AAGCAAGTAC AACAGCAACT GATGGATAAC GCACTGACAC AACCGCGTGT GCTTGTACAT
CGGGATTTCA TGCCACGCAA CCTCATGCTA ACGACCGATG GAGTCACGGT TCTGGATTTC
CAAGACTGTA CAGTCGGCCC AGTCGCCTAC GATCCAGTGA GCCTCTTCAA AGATACCTCG
GTGAGCTGGC CACTGGCACG TGTGGATCGC TGGCTGACGC ACTACCACGC ACGCGCTAAC
GCAGCCAAAA TTCCAGTACA AACACTCCCG CACTTTCTAC GCGATGCAGA CTGGATGGGC
GTACAACGAC ACCTAAAAAA TCTAGGTGTC TTCGCCCGAC TCCATTACCG TGACGGTAAG
TCCTGGTATT TAGAAAACGT ACCGCGCTTT ATCAGCTATC TTGAAGAAAT ACTGCCACGC
CACCCAACAC TCGCACCATT GGCCGAACTG ATTGAGCACC GCATCAAACC AGCACTGGCA
GCACGAATGA TCACGGAGTC AACATGA
|
|---|
| Protein sequence | MKNTEQAYKG TLLSNTDSLP VGHYFTLRMT SSNFSDTTRA TQRLQWIRTT LADSTATLQR
ASSDAGFRSY WRSTSNGLSH ILMDAPPHLE NPHQWLRIHA LLTSGGVRVP HILTQDLEAG
FLLLEDLGIP TLAQRLDADN ADALFDAALD QLIALQCIVP PNDLPRFNTA LLERDASLFE
DWFLYRHLNL TLNRTDLDAL KQVQQQLMDN ALTQPRVLVH RDFMPRNLML TTDGVTVLDF
QDCTVGPVAY DPVSLFKDTS VSWPLARVDR WLTHYHARAN AAKIPVQTLP HFLRDADWMG
VQRHLKNLGV FARLHYRDGK SWYLENVPRF ISYLEEILPR HPTLAPLAEL IEHRIKPALA
ARMITEST
|
|---|
| |