Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1605 |
Symbol | |
ID | 6119433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1679394 |
End bp | 1680230 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649589 |
Product | ABC transporter sugar permease |
Protein accession | YP_001776144 |
Protein GI | 170730711 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.732965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTG AGGTCGGGCG CACGAAGTGG AACATTGTGT TGGTCAATGG GTCCTTGTTT ATGTTTGGGT TGGTGAGTCT AGCGCCCTTG CTTTGGATGG TGTCTGCATC ATTGATGCCA GCGGGTGAGG CCAGTCGCTT TCCGCCGCCA TTTTTTCCTT CTGTGGTGAC GTTCGCGAAC TACCGTGAGT TGTTTGCGCG CGTTGGTATG GGGCGTTATT TCGTTAACAG TTTGCTGGTG TCGTTATCGA TTACATTTGG TTCAGTGCTT TTTAATACGA TGGCTGGTTA CGCTTTCGCC AAGTTACGTT TTGTTGGCCG TGAACGGGTT TTTCAGTTGC TTCTTACGGC GTTAGTGATC CCAGCACAGG TGGCGATGTT GCCATTATTT TTGTTGATGA AGCATTTGCA TTTGGTCGAT AGTTTCGCAG GGGTGATCAT TCCAGCATTG GCGACGGTAT TTGGCATTTT TCTGGTTCGG CAGTACGTGC GGGGTATTCC CAATGATCTG ATTGAGGCTG CACGCATTGA TGGTGCCAGT GAGATGCGGA TTTTCTTCCA GATTGTTCTA CCCATGCTGA AACCGGTACT GGTGACGTTA ATAACGTTTA CGTTCATGGC GTCTTGGAAT GATTTTATGT GGCCGTTGAT TGTGCTCACT GACCAGGCGC ACTACACGTT GCCGGTGACG TTGGCTGCGC TCGCGCGCGA ACACGTCATG GATATAGAAA TGATGATGGC AGGAGCAGTG GTGACTGTGC TCCCGGTATT GCTGTTGTTC ATGCTGTTGC AGCGTTACTA CATCCAGGGT TTGTTGCTGG GGAGCGTGAA AGGGTGA
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Protein sequence | MSREVGRTKW NIVLVNGSLF MFGLVSLAPL LWMVSASLMP AGEASRFPPP FFPSVVTFAN YRELFARVGM GRYFVNSLLV SLSITFGSVL FNTMAGYAFA KLRFVGRERV FQLLLTALVI PAQVAMLPLF LLMKHLHLVD SFAGVIIPAL ATVFGIFLVR QYVRGIPNDL IEAARIDGAS EMRIFFQIVL PMLKPVLVTL ITFTFMASWN DFMWPLIVLT DQAHYTLPVT LAALAREHVM DIEMMMAGAV VTVLPVLLLF MLLQRYYIQG LLLGSVKG
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