Gene Xfasm12_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1564 
Symbol 
ID6120005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1631901 
End bp1632548 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID641649549 
Producthypothetical protein 
Protein accessionYP_001776105 
Protein GI170730672 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.20655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCATTA TACTCTTCAT AATGGAGAGA TTAGTTGGCA TTGGTGAAGC GGCACAGGCA 
TTGGGGGTGT CGATCACGAC GCTGCGGCGC TGGGAAGCGT CAGGCCGGTT GATCGCCGAG 
CATACCGTCG GCGGTCATCG CCGCTACGAT ATGGCGAAAC TGCGCCCTGA GATGTTTCGT 
GCCCAAGCCG AGGCCAACCG GCGTACTGTG GCCTATGCCC GTGTCTCCAG CCACGATCAG 
AAGGACGATC TGGAACGGCA AAAGCAGGTA TTAGAGTTGT ACTGTGCCCA ACAGGGTTGG 
ACATTCGAGG TCATCGCTGA TCTTGGTTCA GGTATGAACT ACCACAAGAA GGGCTTGAAA 
CGGCTGCTTG ATGCCATCAT CGACGGTCAG ATAGGACGGC TGGTCATCAC TCACAAGGAT 
CGTTTGTTGC GCTTTGGTGC TGAACTGGTG TTCGCGCTGT GCGAGGCCAA AAATGTTGAA 
GTGGTCATTC TCAACCAGGG CCAAGACACA AGCTTTGAAG AAGACCTTGC CAAAGATGTG 
CTGGAGATCA TCACTGTGTT TAGTGCACGG TTGTACGGCA GCCGTTCCAG CAAGAACCAG 
AAATTGCTGG AGGCCGTGAA GACAGCGGTA GAGGCATCGC CATGCTGA
 
Protein sequence
MCIILFIMER LVGIGEAAQA LGVSITTLRR WEASGRLIAE HTVGGHRRYD MAKLRPEMFR 
AQAEANRRTV AYARVSSHDQ KDDLERQKQV LELYCAQQGW TFEVIADLGS GMNYHKKGLK 
RLLDAIIDGQ IGRLVITHKD RLLRFGAELV FALCEAKNVE VVILNQGQDT SFEEDLAKDV 
LEIITVFSAR LYGSRSSKNQ KLLEAVKTAV EASPC