Gene Xfasm12_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1501 
Symbol 
ID6119942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1567023 
End bp1567769 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID641649490 
Productsodium ABC transporter ATP-binding protein 
Protein accessionYP_001776046 
Protein GI170730613 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCG CTGAACATCT TCATAAGTCC TTCAAGACCA AGAAGGGGCT GGTTAATGCG 
GTAAAGGACC TCAGTTTCCA CGCTGCTGAT GGTCGAATCA CGGGATTACT CGGTCCCAAC
GGCGCTGGAA AAACGACGAC GTTGCGCATG CTCTATACGC TATTGGTCCC AGATCAGGGC
TGCATCAGCG TCGACGGCGT GGACGCAGTA AGCGATCCGA TGACGGTTCG TCGTGGACTT
GGCGTATTGC CAGATGCATG CGGTATTTAT AAGCGGTTGA CCGCGCGTGA GAATATCGCC
TATTTCGGTG AACTGCATGG TTTGTCCCGC ATAGACATCG CCGCGCGTCT CTCCATACTG
TCGAAGGCGC TGGATATGGA TGACATTCTT GACCGTCAGG CTGCGGGTTT CAGCCATGGC
CAGCGTACTA AGATCGCAAT TGCACGTGCC TTGGTGCATG ACCCACGTAA CATCATCTTG
GATGAGCCGA CGAATGGTTT AGATGTGATG ACCACACGTA AGTTGCGGGA TTTTCTCCGT
CAGTTACGCG CCGAAGGCCG CTGTATTATT TTCTCTAGCC ATATCATGCA AGAAGTGGCG
GCGTTGTGTG ATCACATCAT TGTGATTGCC AAGGGCACGG TAGTAGTGGC CGGTAGTGGC
GATGAGCTGC GCGCGCACAC TGGAAAGGAC AATCTGGAGG ATGCCTTCAT TGATGCAGTT
GGTTCAGATG AAGGGCTGCA TGCATGA
 
Protein sequence
MITAEHLHKS FKTKKGLVNA VKDLSFHAAD GRITGLLGPN GAGKTTTLRM LYTLLVPDQG 
CISVDGVDAV SDPMTVRRGL GVLPDACGIY KRLTARENIA YFGELHGLSR IDIAARLSIL
SKALDMDDIL DRQAAGFSHG QRTKIAIARA LVHDPRNIIL DEPTNGLDVM TTRKLRDFLR
QLRAEGRCII FSSHIMQEVA ALCDHIIVIA KGTVVVAGSG DELRAHTGKD NLEDAFIDAV
GSDEGLHA