Gene Xfasm12_1487 details

Gene Information

• Locus tag: Xfasm12_1487
• ID: 6119928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1556022
• End bp: 1556522
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641649477
• Product: phage-related lysozyme
• Protein accession: YP_001776033
• Protein GI: 170730600
• COG category: [R] General function prediction only
• COG ID: [COG3772] Phage-related lysozyme (muraminidase)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACCA TTGGTGAAGA AGGCATTGCA CTCATCAAGT TTTTTGAGGG TTTGCGGTTG 
CAGGCGTACA TATGCGAAGG CAGTGCGCTG ACGATTGGTT ACGGCGAGAC GGGCAAGCAT 
GTGACGCCTG ATATGTGTCT TGCCAATGAG CAGGAAGCCG ATGCGATGTT ACGTGCTCGA 
TTAGCCAAAG AGTTTGAACC GGCTGTACGG CGTTATGTGC GTGTGCCACT CAAGCAACAG 
CAGTTCGATG CGTTGGTATC GCTGAGCTTC AATATTGGTG TGGGCGCGTT TCACCGCTCG 
ACCTTGCTAA AGCGGCTCAA TGCCGGTGAT GTTGCTGGCG CGGCGGAGCA GTTTCATGTG 
TGGAAATGGG CGGGCGGTCG TGTGCAGTCT GGTTTAATCA TCAGGCGTGC CGCCGAACGT 
GTGTTATTTG AATATGGTGA CTGGCGTGCC GAAGCGGAGA AACAGCGTGC CGCTTTGAAG 
AGCAAGGGCC GCCGTGGTTG A 

 

Protein sequence

MQTIGEEGIA LIKFFEGLRL QAYICEGSAL TIGYGETGKH VTPDMCLANE QEADAMLRAR 
LAKEFEPAVR RYVRVPLKQQ QFDALVSLSF NIGVGAFHRS TLLKRLNAGD VAGAAEQFHV 
WKWAGGRVQS GLIIRRAAER VLFEYGDWRA EAEKQRAALK SKGRRG