| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1477 |
|---|
| Symbol | |
|---|
| ID | 6121340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1546938 |
|---|
| End bp | 1548218 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641649468 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001776024 |
|---|
| Protein GI | 170730591 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC CGACTCTACT CCGTCAACAG CTTGCGAAAC TCGCTGAATG CTTGTTGACT
GTACGCGGTT TCACTCTTGA TGTTGCAGCC CTTGAAGCAT TGGAAAGCGA ACGTAAACGT
ATCCAGGTGC ATACCCAAGA GTTGCAATCC CTGCGTAACA GTAAATCCAA GGCGATTGGC
CAAGCCAGGA GCAAGGGTGA AGATGTGTCT GCGTTAATGG CTGAGGTTGC CGCTTTTAGT
GATGATTTAA AAGCCTCGGA GATAGCGTTG GAGGAGATCC GTACTGAATT AGAGAAAGTG
GCCTTGGATA TTCCCAATTT GCCGCAGCAA GATGTGCCGC TGGGTGCCGA TGAACGTGAA
AATGTAGAGC AGGCCCGTTG GGGAGTGCCA CGTACGTTTG ATTTTGCCAT CAAGGATCAT
GTTGAATTGG GTGCGTGTCA TGGTTGGTTA GATGCCGAGA GTGCTGCCAA GCTATCCGGT
GCGCGTTTCA CTGTATTGCG TGGCCCCATC GCACGGCTGC ATCGCGCACT GGCGCAGTGC
ATGCTTGACT TACATGTTAG CCAGCATGGA TACGAAGAAG TCAATGTCCC AATCATTGTC
AATGCCGACA GCTTACATGG GACTGGTCAA TTACCGAAAT TTGAAGAGGA CATGTTCAGT
ACTCAGCTCG GTGAGCATCG GCGCTATTTG ATTTCGACCT CTGAAATTTC ACTGACTAAT
TTAGTACGTA ACGAGATTAT TGAGGCGGAT CGCCTGCCGT TGCGTATGGT TGCACACTCA
TTGTGTTTCC GTTCCGAGGC AGGCAGCGGT GGTCGTGATA CGCGTGGCAT GATTCGTCAG
CACCAGTTTG AGAAGGTCGA ATTGGTCAGC GTGTGTAAAC CGCAAGAGAG TGAAGGTGAG
CACCATCGTA TGACTCGCTG CGCAGAGACA GTGTTGGAAA TGCTGGGACT GCCCTACCGC
AAGATCCTGC TGTGTACCGG TGATATGGGA TTTGCTGCGA CCAAAACCTA CGACTTGGAA
GTTTGGCTGC CGTCGCAGGG AATGTATCGC GAGATTTCAT CGTGTTCCAA TTGCGGTGAT
TTCCAAGCCA GACGCATGCA AGCCCGTTGG CGCAATTCTG TCACCGGCAA GCCGGAATTG
GTACACACAC TCAACGGTTC TGGTGTCGCT GTTGGCCGTG CAATGATTGC GGTGATGGAG
AACTATCAGA ATGCTGATGG TTCGATTACG GTGCCGGAGG TGTTGCGTCC TTACATGGAT
GGTTTGAGTC GGATTGGTTG A
|
|---|
| Protein sequence | MLDPTLLRQQ LAKLAECLLT VRGFTLDVAA LEALESERKR IQVHTQELQS LRNSKSKAIG
QARSKGEDVS ALMAEVAAFS DDLKASEIAL EEIRTELEKV ALDIPNLPQQ DVPLGADERE
NVEQARWGVP RTFDFAIKDH VELGACHGWL DAESAAKLSG ARFTVLRGPI ARLHRALAQC
MLDLHVSQHG YEEVNVPIIV NADSLHGTGQ LPKFEEDMFS TQLGEHRRYL ISTSEISLTN
LVRNEIIEAD RLPLRMVAHS LCFRSEAGSG GRDTRGMIRQ HQFEKVELVS VCKPQESEGE
HHRMTRCAET VLEMLGLPYR KILLCTGDMG FAATKTYDLE VWLPSQGMYR EISSCSNCGD
FQARRMQARW RNSVTGKPEL VHTLNGSGVA VGRAMIAVME NYQNADGSIT VPEVLRPYMD
GLSRIG
|
|---|
| |