Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1408 |
Symbol | |
ID | 6121271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1466094 |
End bp | 1467545 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641649405 |
Product | cationic amino acid transporter |
Protein accession | YP_001775961 |
Protein GI | 170730528 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0734654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAA AACATTTATT CATCGTCAAA CCGATCGAGC CGACAAATCA CACAGGGACA GGTAAAGGCG AAACGCAACT CAAAAGATCG CTAACGGCAA GACAGTTAGT GATGCTCGGC ATCGGGGCCG TGATTGGCGC TGGTATTTTC GTGCTCAGCG GACACGCTGC CGCCGAGTAT GCCGGGCCAG CCGTGGTGCT GAGCTACATT CTGGCGGGAA TAGCCTGTGC TTTGGCTGGG CTGTGTTATG CGGAGTTCGC GGCAATGCTG CCGGTCTCCG GTTCCGCTTA CTCTTATGCC TACGCGACGC TCGGGGAATT CACGGCTTGG TTCATCGGCT GGAATCTGGT CCTGGAATAT ATGTTCTCTG CCTCGACCGT GGCGGTCGGC TGGTCCGGTT ATCTCAATAG TTTCCTGAGC AGTTTCGGTT ATGGGCTGCC AGCCTCGCTA TCCAGTGCAC CTCTGGACGT AGTCGATGGG CGGCTGATTT ATAGCGGTGG CCTGATCAAT CTGCCGGCAG TCGCGATTGT GGCCGCGATC AGTGGGCTGT GCTACGTCGG GATCACTCAA TCGGCCTTCG TCAACTCCAT CACCGTGGCA ATCAAAGTCA GTGTCATCGT GCTGTTCATC GCTTTCGCCA CACGCTATGT CAACACGGAC AACTGGGTCC CCTTCGTCCC GGACAACGTG GCACCAGGCA AGTACGGCAT TGAAGGGGTG ATCCGCGGCG CAGCCGTGGT GTTTTTCTCC TATATCGGCT TTGATGCAGT CTCCACCACC GCGGGGGAAG CCAAGAATCC GCAACGTGAC ATGCCCATCG GCATCCTCGG CTCGCTCGCC ATCTGTACGG TGATCTACAT TGTCTTCTCC GGTGTTCTCA CCGGCCTGAT GCACTACTCG CAGTTGGATA CGCCCAAACC CGTGGCCACC GCGCTGGAAA CCTACCCAAC GCTGTCATGG CTCAAGCATG TCGTAGAAAT CGGCGCGATT GCAGGGCTGA GTTCAACGAT GCTGATGATG CTGATGGCAC AACCGCGGAT TTTCTACGCG ATGTCGCAGG ATGGCCTGCT GCCCAAGTTG CTGTCTAAAG TGCATCCAAA ATTCCAGACT CCCCACGTAG GTACGCTCAT CGTCGGTGCC TGTGCCTGTA CTTTAGCCGG ACTGTTTCCA ATCAGTCTGC TTGGCGATCT GGTCTCCATG GGCACGCTGC TAGCGTTCGC TACGGTCTGC ATTGGCATCG TGGTACTACG CCGTACCCGC CCGGATCTGC CTCGCCCCTT CCGGGTCCCC ATTTACTGGG TGATCGCCCC TGCAGGGGCG GCAGCCTGTC TGTACCTGTT CTGGCAGCCG TTCACCGAGC ACTGGCCGCT GATGGTCGGT TGGACGGTAC TCGGCTTGGT GATGTATGGC TTATACGGCT ATCACCACAG TAAATTACGA CATGGTGGCT AA
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Protein sequence | MLKKHLFIVK PIEPTNHTGT GKGETQLKRS LTARQLVMLG IGAVIGAGIF VLSGHAAAEY AGPAVVLSYI LAGIACALAG LCYAEFAAML PVSGSAYSYA YATLGEFTAW FIGWNLVLEY MFSASTVAVG WSGYLNSFLS SFGYGLPASL SSAPLDVVDG RLIYSGGLIN LPAVAIVAAI SGLCYVGITQ SAFVNSITVA IKVSVIVLFI AFATRYVNTD NWVPFVPDNV APGKYGIEGV IRGAAVVFFS YIGFDAVSTT AGEAKNPQRD MPIGILGSLA ICTVIYIVFS GVLTGLMHYS QLDTPKPVAT ALETYPTLSW LKHVVEIGAI AGLSSTMLMM LMAQPRIFYA MSQDGLLPKL LSKVHPKFQT PHVGTLIVGA CACTLAGLFP ISLLGDLVSM GTLLAFATVC IGIVVLRRTR PDLPRPFRVP IYWVIAPAGA AACLYLFWQP FTEHWPLMVG WTVLGLVMYG LYGYHHSKLR HGG
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