Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1385 |
Symbol | |
ID | 6119906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1439336 |
End bp | 1440448 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649387 |
Product | membrane-bound lytic transglycosylase |
Protein accession | YP_001775943 |
Protein GI | 170730510 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0841166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGC GCATAGCAAC CTCAATACTG ACTCTCGGCC TCGTTGCCTG TGCATCGCAA CCCTCATCCA AGCGGCTAGT CAGTACAACG ACAACAGAAC CAACGAAAAA GATAGATCCC TCAAAAGTGG AAGAAACACC ACTGAATCTG TCGCCTGTCC CATTCGAAAT CGCGCGTAAC AATTTCATAC GTGATACTGC AACCAAGTAC AACTTGGACC CGATATGGAT CGAAAAAACC CTAGCACAAG CCCAATTTAA AGACGCAATA GTAGCGGCCA TGTCGCGCCC AGCCGAGCAA GTCAAACCGT GGAACGAATA CCGATCAATG TTCATCGCTC AGGCAAGAAT TGACAGTGGA CGTCAATTCT TAGCCTCTCA CAAGATACAA CTCAAAAAAG TCGAAGCTGC TACCGGCGTA CCAGCAGAAC TCATCGTCGC AATTATTGGT GTCGAAAGCA GCTATGGTAC TAGCCCCGGG AAATACCGCG TACTGGACGC GCTATACACA CTCGCCTTTA AATACCCGCG CAGCGGCGAC CCAAACAAAC TCAAACGCGA AGTACAACGG GAATTATTTT TTCGCGATGA ACTCGCCCAA CTATTCGCAC TCAGTAAAGA AGAAAACCTG GATATCACCA CATTGACTGG CAGTTACGCC GGAGCAATGG GCATGGGACA GTTCATGCCC TCCAGCTATC GTCAATATGC AGTAGACGGC GATGGGGACG GCAAACGCAA CCTATTCACC AACGAGGATG ACGTATTCGC TTCGATCGCC AACTACTTCC TCCGAAAAGG AGGCTGGGTA CGTGGCGCTC TGGTCGCAGT ACCAGCCACC CTCGCTTCGG GTTACCAAGA ATTCGACCCA CCCGACTGGA TCCCGCGTTA CACCCTGACC GAATTAGCCG CACGTGGCTA CCATACCTAT GTTCCCGTCA CAGCCGGTAT CACCGCCACC CCGATCAGTC TGGACAACAC CACCAGTAAA GAATACTGGC TGTGCTTCCA GAACTACTAC GCGATTACCC GCTACAACCC CTCCAAAATG TACGCCATGG CCGTGTTCCA ACTGTCCGAA TCCATTGCCG GCCGCACACT CCCCCAAACA TGA
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Protein sequence | MIKRIATSIL TLGLVACASQ PSSKRLVSTT TTEPTKKIDP SKVEETPLNL SPVPFEIARN NFIRDTATKY NLDPIWIEKT LAQAQFKDAI VAAMSRPAEQ VKPWNEYRSM FIAQARIDSG RQFLASHKIQ LKKVEAATGV PAELIVAIIG VESSYGTSPG KYRVLDALYT LAFKYPRSGD PNKLKREVQR ELFFRDELAQ LFALSKEENL DITTLTGSYA GAMGMGQFMP SSYRQYAVDG DGDGKRNLFT NEDDVFASIA NYFLRKGGWV RGALVAVPAT LASGYQEFDP PDWIPRYTLT ELAARGYHTY VPVTAGITAT PISLDNTTSK EYWLCFQNYY AITRYNPSKM YAMAVFQLSE SIAGRTLPQT
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