Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1352 |
Symbol | ksgA |
ID | 6119872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1410738 |
End bp | 1411631 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641649355 |
Product | dimethyladenosine transferase |
Protein accession | YP_001775912 |
Protein GI | 170730479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.212433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCAAC CTCCCATTAA CGTGCATACG CCACACTCCA GCGCACAATT GACACTGCTG CCGCCCAAAC ACCTCAATCA ATTAGAATCC CATGGCATGG AATCTCGACT GTTCAATACA CCAGCGAAAA AAGCGTTCGG CCAACATTTT CTTGTTGACC GTTACTACAT CGACCGCATC ATCCATGCCA TCAACCCTCA GCCCAACGAC CACATCGTCG AAATCGGCCC CGGTCAGGGG GCAATCACCC TGCCACTGCT GAAATGCTGC GGCTCCCTGA CCGCAATTGA GTTGGACCGC GACCTGATCG CTCCGCTGAC CGCTGCTGCT ACGCCTATAG GCAAGCTAGA CATCATCCAC CGCGACGTAC TCACAGTAGA CCTCTCCATC CTAGCCAAAC AAGGAAATAA GAAATTACGC CTGGTCGGCA ACCTCCCCTA CAACATCTCC TCACCGATCC TTTTCCATGT ACTCCAGCAA GCTGCAATCA TCGCCGACAT GCACTTCATG TTGCAGAAAG AAGTCGTCGA CCGCATGGCA GCACCTCCAG GTAGCAAGGT CTACGGTCGA CTCAGTGTCA TGCTACAAGC TTGGTGTGAG GTCACGACCA TGTTCGTCGT GCCGCCTGAC GCCTTCCAAC CACCACCGAA GGTAAACTCG GCAATCACCA GACTCGTGCC ACGCGATCCA ACAACAATCC GTATTGCTGA TACAAAGCGT TTCAGCGACA TCGTTCGTGC CGCATTTGGT CAACGTCGCA AGACACTGCG TAATTCCCTA GCCGACATAT GCACACCGGC TCACTTCGAA CATGCCGGGA TACGCACTAA CGCACGTGCC GAACAACTGG AAGTCACCGA ATTCATCGCA CTCGCCAATG CCAAGAACAC TTAA
|
Protein sequence | MMQPPINVHT PHSSAQLTLL PPKHLNQLES HGMESRLFNT PAKKAFGQHF LVDRYYIDRI IHAINPQPND HIVEIGPGQG AITLPLLKCC GSLTAIELDR DLIAPLTAAA TPIGKLDIIH RDVLTVDLSI LAKQGNKKLR LVGNLPYNIS SPILFHVLQQ AAIIADMHFM LQKEVVDRMA APPGSKVYGR LSVMLQAWCE VTTMFVVPPD AFQPPPKVNS AITRLVPRDP TTIRIADTKR FSDIVRAAFG QRRKTLRNSL ADICTPAHFE HAGIRTNARA EQLEVTEFIA LANAKNT
|
| |