| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1263 |
|---|
| Symbol | |
|---|
| ID | 6121205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1332307 |
|---|
| End bp | 1333674 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649274 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_001775832 |
|---|
| Protein GI | 170730399 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC AGGGCTGGCA CCGGAGTTTG CGTCTAATTG CAACTGGACT ACTGGGCAGC
TTAATGCCCT TCACTCTCAG TTCCACAGAT CAAACTCCAG TCCTCAAGCC GCAGTCGTTA
CCGCTGATCG CTAGCTCAGA CGACACACAA GACAAGGTGG CACTGCTGAC GCACCGTTTC
GATATCAAAG CAATCGAATC GATGGCCGAG CAACTGACCT ATGGCCAAAA AGTCCCAGGG
TTGGCAATGG CAATTGTCCA AGGGGGGCAC ATCCTTAGCA TGCGCGGCTA TGGAGTTAAC
GATGTCAGCA ACCCGCAGCC TGTGAATGCA CACACCGTTT TTCGCCTTGC TTCACTTTCC
AAAGCCTTTG CCAGCGCCAT GGCCGGCTTA CTTGTCAACG ATGGCATCCT CAGTTGGAAC
AGCAAGATTG TGGATTACGT CCCCGGCTTC CACCTAAGCA ACCCAACCGC AACAAACAAA
TTGACTGTTG CCGATGTCCT CAGCCATCGC GTCGGCCTGA GCCGCAATGC CTATGACGGC
GAAATCGAGT CGAATGCCGA CTATTATTCA CTGAATCGCA AACTCGCCTA TGCACCACTC
ATCTGTTCCC CAGGTGAGTG TTACTCCTAC CAAAACGTGG CCTTCAGCCT GATCGGCGAC
GTCGTGTTTG CTGCCTCCGG AGACTTTTAT GAACAGGCGG TGGAACGCCG CATCTTTAAG
CCATTGGGAA TGAATGATGC CAGCCTTGGT CTAGCTGGCA TTCGATCCAG TCAAAGTTGG
GCACGACCAC ATACACGTAC CAAAAAGGGA TGGAGGCCCG TCGTCGTCAA ACAAACGTAT
TACCACTTAG CACCAGCCGC CGGTGTCAAC GCCAGTGCAA GCGATATGGC TCAATGGCTA
CTGGCACAAA CAGGACATAA GCCGGAAGTG CTACCCGCAC CATTGCTCGT GACATTACAC
ACACCACTTG TCAGCACACC CAGTGAAGTC CGCCCAGGCT GGCGCGAACA ACGTTTATTG
GCAGCAAGCT ACGCATTGGG CTGGCGCCTG TTCAACTACA ATGGACACAC ACTCGTATTC
CATGCCGGCG CGGTACAAGG CTACCGCGGT TTAGTCGCAC TGCTACCAGA ACGCGATTTT
GGGGTGGCCA TCTTATGTAA TGGTGAAACC GGCCTACCTT CCGGGCTGCT ACTCACTATC
CTGGACCGGG TACTCGGTCT ACGGGGACAA CACCGACTGG ATCTTGAAAC TGATAGCGAC
TTCAGCAGCG AAAACATGCT AGCTAAGAAA TCAACAAACG AATCGAATTC CCAGAGCAGT
TTAGAAAACA AACCGTCACC ACCACCACCT TCAACGCAAC TACATTAG
|
|---|
| Protein sequence | MKQQGWHRSL RLIATGLLGS LMPFTLSSTD QTPVLKPQSL PLIASSDDTQ DKVALLTHRF
DIKAIESMAE QLTYGQKVPG LAMAIVQGGH ILSMRGYGVN DVSNPQPVNA HTVFRLASLS
KAFASAMAGL LVNDGILSWN SKIVDYVPGF HLSNPTATNK LTVADVLSHR VGLSRNAYDG
EIESNADYYS LNRKLAYAPL ICSPGECYSY QNVAFSLIGD VVFAASGDFY EQAVERRIFK
PLGMNDASLG LAGIRSSQSW ARPHTRTKKG WRPVVVKQTY YHLAPAAGVN ASASDMAQWL
LAQTGHKPEV LPAPLLVTLH TPLVSTPSEV RPGWREQRLL AASYALGWRL FNYNGHTLVF
HAGAVQGYRG LVALLPERDF GVAILCNGET GLPSGLLLTI LDRVLGLRGQ HRLDLETDSD
FSSENMLAKK STNESNSQSS LENKPSPPPP STQLH
|
|---|
| |