Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1255 |
Symbol | |
ID | 6121197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1322842 |
End bp | 1323810 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649266 |
Product | transcriptional regulator |
Protein accession | YP_001775824 |
Protein GI | 170730391 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTT ATCAACGTAT CGGTGTCATG CACTGTTTAT TGAAGTCGGT GTCTTGTCCA ATTGGCGTGT TGCGCTTTCA GGATGAATTG GGTTGCTCTG CTGAGACGGT CTATCATGAT GTGGCCTTCA TGCGTAATGT GCTAATGGCC CCGATTGAGG GGGATGGAGA GACGGGGTTT TTTTATCTCT TGAGTGAGGG TAACCAGTTT GAGTTACCGG GGGTATGGTT CAATTCGGAG GAGTTGTACG CGTTGCTGGC GATGCAACAA CAGTTGGCAT CTGCATCTAC GGATGGTCTT GTATCTTCCA TGCTGTTACC GCTGCAACAG CACATTGAAA ATTTGTTAGC TGCTCAGCCT GGTATGCCAC CTTGGCAAGT GGGACGTGTA CGCGTGATCT CACACCGAAA TCGTAAGTTG GACCAAGTAA GTTTCCGTAT CGTTGCTTCT GCGGTGCTTG AGCGTAAGCA GCTTGGCTTT TACTATCGTG CGCGTTCTAC TGACGAAGCA AGTAATCGTG TTGTCTCGCC ACAATGCATG ATCCACTACT GCGGTAATTG GTACCTCGAC GCTTGGGATC ATAGTCGTCA GGGAGTACGC AGTTTCGCTG TAGACAGGAT CTATCGTGCT CGGATTATTG ACGTGCAGGC ACATGATCTA CCCGATAGCG ATCTAGAGGA GCAGTCATCG GGTAGTTACG GTATTTTCTC AGGGTTACCC AAAGGCTGGG CGACAATCGT GTTTAGCTCC AAAGCGGCAC GTTGGGTCGC TGACGAATAC TGGCATGTTA AACAGCGGGG GCGTTTTCTT GTCGATGGTC GCTATGAATT GCAGGTGCCG TACAGCATCT CGCGCGAGCT GTTGATGGAC GTGTTGCATT ATGGTTCGGA TGCAGAGATT GTTGAGCCAC CTGCACTACG TGAGCAAGCA AAGGCCTTAT TGTCGCTGGC GTTGAGCAAC TATGAGTGA
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Protein sequence | MDLYQRIGVM HCLLKSVSCP IGVLRFQDEL GCSAETVYHD VAFMRNVLMA PIEGDGETGF FYLLSEGNQF ELPGVWFNSE ELYALLAMQQ QLASASTDGL VSSMLLPLQQ HIENLLAAQP GMPPWQVGRV RVISHRNRKL DQVSFRIVAS AVLERKQLGF YYRARSTDEA SNRVVSPQCM IHYCGNWYLD AWDHSRQGVR SFAVDRIYRA RIIDVQAHDL PDSDLEEQSS GSYGIFSGLP KGWATIVFSS KAARWVADEY WHVKQRGRFL VDGRYELQVP YSISRELLMD VLHYGSDAEI VEPPALREQA KALLSLALSN YE
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