Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1244 |
Symbol | |
ID | 6120467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1310664 |
End bp | 1313963 |
Gene Length | 3300 bp |
Protein Length | 1099 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641649257 |
Product | ankyrin-like protein |
Protein accession | YP_001775815 |
Protein GI | 170730382 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGAGA TTTTACGCGT GCGTACACCT CTGAAATTGT CTGTGTTGGT GCTGTCCCTG GCAGTGCTAC TGCATCTGCT TGCTGGTTTT GGGGGCGTGG CAGTGCTGGC GTTATGGGGA GTGCAACCGA TGCTGGCATT GGGTGTTTCC TGGTTACGTG GTACACGTCC ACTGCCTCAT TCACTGCGTG AGCTGTGGCG GCAATGGTTG CTGCTTGCTG TGTTGTGGGC TGCTGGTTTG ACTGTAGTGG TGTTGCCTGC GTTGTGGCCA CTGGCGGTGT TGTGCAATAG CGGTAGTCTT GAGGGGGCAT TGGTGTTGAG TGCTGCTGTC AGCGTCAGTC TGCTGGTACT GTGGCGTACT TGGCCATTAT GGCCGCAGAT AGAGCGTGGG CCTTGTACGT TTCGCAGCAG TTGGTACGTT TTTCCAAGTC ATAATTTGGC ATCCTGGCCA GGTCTGGGTA TCGCAGTGCT GGTCCTGATG ATCGGTTCAG TAGCGGTGGC GCTGGCTTGG CCTGGGTTGC TCACACTATC CCTGCGTTGG GTATTAGCTG TTGTTGCTGC GTTGTTGGCA CCGGCGGTGC ACGTGCTGTT GCAACGTGTT CAATCGTGTG GGTTGACAGC AAGGGTGGAG CCGCCAACGC CAAGAGAACC GTTGCCAGAG GTGACGGCCA GCCCAGAGAT GGTGCCACCG ATCCCAAGTG ACCGGCTTGT GGCAGATTTG TATGAAGCAG CCCGTACCGG CCGTGTTGAT CGTGCGTTGC AATTGCTTGA GACCGGTGCT GATCCACATG CACTGCCATT TGAAAACGCA CGTGATCAAC GTAATTTGAT GGTGTTGGCT GCAATTTTGC CGGACCTGCG TTTGCTGCGT GAGCTCATCG TACGTCGTGT TGACGTTAAC CAGCGACACC GAGGGATGAC AGCATTATTA GCCGCCACTC GTGACAGTTG GCATGGTCGG TCTGAGGCGG TACAGATGTT GCTGGCAAAT GGTGCTGATC CACGTGTTGT CGATGCTGAT CGTAATACAC CCTTACATCA TGCCGCCCGC AGTTCTGATC CTGGGGTGGC GGCGTTATTA CGTGATGCGG CGGCTGAGTT GGATGCGCTC AACTGCGATG GGTTATCGCC GTTGGCTGCG GCTTGTCAAG TAGGTAATTG GCGCTTGGCC AAGTTCTTGC TTGAACGTGG TGCCCAGCCA GAGCCGATTG GAGGCACTCC AGTTTTGTTG GCTGCGGCTG GTACCGATGA GGATGATCCA ACCGGCGTAC TGTTGTTGCT GAAGCATAAG GCTCGGGTGG ATGCGCGTGA TCGTTTACGT CGCACTGCAC TTCATGAGGC TGCCGAAGCG GGCCACAGTG AGATTGTCAA AGCGTTGCTG GAGGCTGCCG CCAACCTGGA GGTGCGCGAT ATGGCGGGAC GCACGCCCTT GCTAGAGGCA GCCCGGCAGG CACGCATTGT AGTGTTGGAG TGCTTGTTGT CTCACAAGGC CGACAGGTTG GCTGTTGATA GTGAGGGCCG TAATGCGGTG TTTTTGGCTT GCTTGTCTGA GCGGGTGACT CTGCCGCTGA TCCGGCGTTT GCTCGAAATT GGCGTGCCAG TCGTTGCGGA TAAGCATGGT CACCGTCCCG TTGACATTGC TGCCAAGGTT GGGCGCTGGT CGATCGTATC TCTGCTTGAT CCTGATTATC CTCTTCCGGT GGTCGTCAGT GAATCTGTCA GTGTCGGTGG GGTGCTGGAT CGCCCCCCCC TGACGTTGTT GCGTGATGGA CTACAGTTGG GTAGCTTCGG CAGTTTTTCG GAATTAATTG AGCTGTGTAG TGCAGAGGAG TTGGGGACGC TTCTGCATGA TCCACACTTT GCGTTGAATC CCGATGTGGT GGATTGGTTG CTCACTCATG GAGCTTCACC AACGGTGCCC AATAGCTCTG GTAACGTGCC GATGTTTTCA TTATTGGCGC GTGGTATTGA GGCAGTACCG GTCCTGAAGG TGTTCTTGCG TCATGGTGTA TCGCCCGCTG GTGTCGGTGG GTTGGGGCTG TGGTTGGCTG CCTGTATGCA GTGTGATGCG GCCTCCCGTA GTCTGGAGCA GTTTGCCTGC GAGTTGTTGG AGCATGGTGC TGATCCGTTG ATGCCTTCAC CAGATGGCGA TTCTCCGTTG GTGCTTACAG TGCGATTGGG CTGGTTACGT TTGCAACAGG CTTTACTGGA AGCTGGCGTG GATTGTGAGG TCCGTGACAG CTACGGTATG ACAGCGTTGC ATCAAGCAAC GGTCCTTGGT CGTGAAGCGG CTTTGAAGCT CTTGGTGATG CATGGTGCAA ATCCGGATGC ACGTACTCCA GACGGCCAGA CTTCGCTGGG TATGGCCCTA TCCAGTGGTA GGCGTGATTT AGCTACCTGG CTGGACTGGC GTAGTTGGCC GCTGCCGCGT CGTCCATTAC GACATGCGGA TGTTCCGGAT GCAGCGATGA GGGGAGATAC GGAGGCGGTT CGTCGCTTGC TTGATTTGGG GTTGCCGGTA GATGCGGTTG ATGCGCAGGG GTGTACTGCG TTATTGCGTG CTGCCGGTGG CGGCCATTTG CAAGTGGTGC GTCTGTTGTT GATGCGTGGG GCCGATTTAC AGCGTGCCTC CAACAATGGC GCCACGCCGT TGTCGGCAGC GGTAAGCATG CGTCAGAACG AGATCATCCC TGCTCTTTTG GACGCAGGTG CTCCACTTGA ACACCGTTTT CCGGAGGAGA TGACGGTACT GATGTTGGCT GCTGCGCTGG GTTTCCCGGA TATTGTGATG CGTTTGATTG CGGCTGGTGC TGATGTGCAT GCCAGTAACG TGCAGGGTTT TGCTGCACTT CATTGTGCAG CGTTATATGG TTTTAGTGCT CGCGACAAAA CGCGGTTGTT GGCGTTGTTG GATGCGTTGC TTTTGGCTGG AGCGAATCCG GGACAGCTTG CTGACGGTAA AATCACTCCA TTGCTCTTGT TGCTTGGTGC GCGTGCTGAA CGAGGCGCGG TTTGTGATGA GCAAGTGGTA CTGGCTGGAG TGGAGCGCCT CCTTGAAGAG GGGGAGACTT TAGACGTGGT AGACACACGG GGTTTTGGTC CACTTCATTT GGCTGCGCTA CATGGGTTGC CGCTTTTAGT GAAATGTTTG TTGCGTGCTG GCGCTGATTC AGAGCGCCGT GACGCGTTAA ATCGTTCCCC GCGTGAGATT GCAATCATGC GCGGTTTCAT TGATGTTGCT GGACAGTTTG AGTCGGAGCA ACTGGGTGTT GCTTCGATGG GACGGTTTTT ACGTGATTAG
|
Protein sequence | MIEILRVRTP LKLSVLVLSL AVLLHLLAGF GGVAVLALWG VQPMLALGVS WLRGTRPLPH SLRELWRQWL LLAVLWAAGL TVVVLPALWP LAVLCNSGSL EGALVLSAAV SVSLLVLWRT WPLWPQIERG PCTFRSSWYV FPSHNLASWP GLGIAVLVLM IGSVAVALAW PGLLTLSLRW VLAVVAALLA PAVHVLLQRV QSCGLTARVE PPTPREPLPE VTASPEMVPP IPSDRLVADL YEAARTGRVD RALQLLETGA DPHALPFENA RDQRNLMVLA AILPDLRLLR ELIVRRVDVN QRHRGMTALL AATRDSWHGR SEAVQMLLAN GADPRVVDAD RNTPLHHAAR SSDPGVAALL RDAAAELDAL NCDGLSPLAA ACQVGNWRLA KFLLERGAQP EPIGGTPVLL AAAGTDEDDP TGVLLLLKHK ARVDARDRLR RTALHEAAEA GHSEIVKALL EAAANLEVRD MAGRTPLLEA ARQARIVVLE CLLSHKADRL AVDSEGRNAV FLACLSERVT LPLIRRLLEI GVPVVADKHG HRPVDIAAKV GRWSIVSLLD PDYPLPVVVS ESVSVGGVLD RPPLTLLRDG LQLGSFGSFS ELIELCSAEE LGTLLHDPHF ALNPDVVDWL LTHGASPTVP NSSGNVPMFS LLARGIEAVP VLKVFLRHGV SPAGVGGLGL WLAACMQCDA ASRSLEQFAC ELLEHGADPL MPSPDGDSPL VLTVRLGWLR LQQALLEAGV DCEVRDSYGM TALHQATVLG REAALKLLVM HGANPDARTP DGQTSLGMAL SSGRRDLATW LDWRSWPLPR RPLRHADVPD AAMRGDTEAV RRLLDLGLPV DAVDAQGCTA LLRAAGGGHL QVVRLLLMRG ADLQRASNNG ATPLSAAVSM RQNEIIPALL DAGAPLEHRF PEEMTVLMLA AALGFPDIVM RLIAAGADVH ASNVQGFAAL HCAALYGFSA RDKTRLLALL DALLLAGANP GQLADGKITP LLLLLGARAE RGAVCDEQVV LAGVERLLEE GETLDVVDTR GFGPLHLAAL HGLPLLVKCL LRAGADSERR DALNRSPREI AIMRGFIDVA GQFESEQLGV ASMGRFLRD
|
| |