Gene Xfasm12_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1244 
Symbol 
ID6120467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1310664 
End bp1313963 
Gene Length3300 bp 
Protein Length1099 aa 
Translation table11 
GC content56% 
IMG OID641649257 
Productankyrin-like protein 
Protein accessionYP_001775815 
Protein GI170730382 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGA TTTTACGCGT GCGTACACCT CTGAAATTGT CTGTGTTGGT GCTGTCCCTG 
GCAGTGCTAC TGCATCTGCT TGCTGGTTTT GGGGGCGTGG CAGTGCTGGC GTTATGGGGA
GTGCAACCGA TGCTGGCATT GGGTGTTTCC TGGTTACGTG GTACACGTCC ACTGCCTCAT
TCACTGCGTG AGCTGTGGCG GCAATGGTTG CTGCTTGCTG TGTTGTGGGC TGCTGGTTTG
ACTGTAGTGG TGTTGCCTGC GTTGTGGCCA CTGGCGGTGT TGTGCAATAG CGGTAGTCTT
GAGGGGGCAT TGGTGTTGAG TGCTGCTGTC AGCGTCAGTC TGCTGGTACT GTGGCGTACT
TGGCCATTAT GGCCGCAGAT AGAGCGTGGG CCTTGTACGT TTCGCAGCAG TTGGTACGTT
TTTCCAAGTC ATAATTTGGC ATCCTGGCCA GGTCTGGGTA TCGCAGTGCT GGTCCTGATG
ATCGGTTCAG TAGCGGTGGC GCTGGCTTGG CCTGGGTTGC TCACACTATC CCTGCGTTGG
GTATTAGCTG TTGTTGCTGC GTTGTTGGCA CCGGCGGTGC ACGTGCTGTT GCAACGTGTT
CAATCGTGTG GGTTGACAGC AAGGGTGGAG CCGCCAACGC CAAGAGAACC GTTGCCAGAG
GTGACGGCCA GCCCAGAGAT GGTGCCACCG ATCCCAAGTG ACCGGCTTGT GGCAGATTTG
TATGAAGCAG CCCGTACCGG CCGTGTTGAT CGTGCGTTGC AATTGCTTGA GACCGGTGCT
GATCCACATG CACTGCCATT TGAAAACGCA CGTGATCAAC GTAATTTGAT GGTGTTGGCT
GCAATTTTGC CGGACCTGCG TTTGCTGCGT GAGCTCATCG TACGTCGTGT TGACGTTAAC
CAGCGACACC GAGGGATGAC AGCATTATTA GCCGCCACTC GTGACAGTTG GCATGGTCGG
TCTGAGGCGG TACAGATGTT GCTGGCAAAT GGTGCTGATC CACGTGTTGT CGATGCTGAT
CGTAATACAC CCTTACATCA TGCCGCCCGC AGTTCTGATC CTGGGGTGGC GGCGTTATTA
CGTGATGCGG CGGCTGAGTT GGATGCGCTC AACTGCGATG GGTTATCGCC GTTGGCTGCG
GCTTGTCAAG TAGGTAATTG GCGCTTGGCC AAGTTCTTGC TTGAACGTGG TGCCCAGCCA
GAGCCGATTG GAGGCACTCC AGTTTTGTTG GCTGCGGCTG GTACCGATGA GGATGATCCA
ACCGGCGTAC TGTTGTTGCT GAAGCATAAG GCTCGGGTGG ATGCGCGTGA TCGTTTACGT
CGCACTGCAC TTCATGAGGC TGCCGAAGCG GGCCACAGTG AGATTGTCAA AGCGTTGCTG
GAGGCTGCCG CCAACCTGGA GGTGCGCGAT ATGGCGGGAC GCACGCCCTT GCTAGAGGCA
GCCCGGCAGG CACGCATTGT AGTGTTGGAG TGCTTGTTGT CTCACAAGGC CGACAGGTTG
GCTGTTGATA GTGAGGGCCG TAATGCGGTG TTTTTGGCTT GCTTGTCTGA GCGGGTGACT
CTGCCGCTGA TCCGGCGTTT GCTCGAAATT GGCGTGCCAG TCGTTGCGGA TAAGCATGGT
CACCGTCCCG TTGACATTGC TGCCAAGGTT GGGCGCTGGT CGATCGTATC TCTGCTTGAT
CCTGATTATC CTCTTCCGGT GGTCGTCAGT GAATCTGTCA GTGTCGGTGG GGTGCTGGAT
CGCCCCCCCC TGACGTTGTT GCGTGATGGA CTACAGTTGG GTAGCTTCGG CAGTTTTTCG
GAATTAATTG AGCTGTGTAG TGCAGAGGAG TTGGGGACGC TTCTGCATGA TCCACACTTT
GCGTTGAATC CCGATGTGGT GGATTGGTTG CTCACTCATG GAGCTTCACC AACGGTGCCC
AATAGCTCTG GTAACGTGCC GATGTTTTCA TTATTGGCGC GTGGTATTGA GGCAGTACCG
GTCCTGAAGG TGTTCTTGCG TCATGGTGTA TCGCCCGCTG GTGTCGGTGG GTTGGGGCTG
TGGTTGGCTG CCTGTATGCA GTGTGATGCG GCCTCCCGTA GTCTGGAGCA GTTTGCCTGC
GAGTTGTTGG AGCATGGTGC TGATCCGTTG ATGCCTTCAC CAGATGGCGA TTCTCCGTTG
GTGCTTACAG TGCGATTGGG CTGGTTACGT TTGCAACAGG CTTTACTGGA AGCTGGCGTG
GATTGTGAGG TCCGTGACAG CTACGGTATG ACAGCGTTGC ATCAAGCAAC GGTCCTTGGT
CGTGAAGCGG CTTTGAAGCT CTTGGTGATG CATGGTGCAA ATCCGGATGC ACGTACTCCA
GACGGCCAGA CTTCGCTGGG TATGGCCCTA TCCAGTGGTA GGCGTGATTT AGCTACCTGG
CTGGACTGGC GTAGTTGGCC GCTGCCGCGT CGTCCATTAC GACATGCGGA TGTTCCGGAT
GCAGCGATGA GGGGAGATAC GGAGGCGGTT CGTCGCTTGC TTGATTTGGG GTTGCCGGTA
GATGCGGTTG ATGCGCAGGG GTGTACTGCG TTATTGCGTG CTGCCGGTGG CGGCCATTTG
CAAGTGGTGC GTCTGTTGTT GATGCGTGGG GCCGATTTAC AGCGTGCCTC CAACAATGGC
GCCACGCCGT TGTCGGCAGC GGTAAGCATG CGTCAGAACG AGATCATCCC TGCTCTTTTG
GACGCAGGTG CTCCACTTGA ACACCGTTTT CCGGAGGAGA TGACGGTACT GATGTTGGCT
GCTGCGCTGG GTTTCCCGGA TATTGTGATG CGTTTGATTG CGGCTGGTGC TGATGTGCAT
GCCAGTAACG TGCAGGGTTT TGCTGCACTT CATTGTGCAG CGTTATATGG TTTTAGTGCT
CGCGACAAAA CGCGGTTGTT GGCGTTGTTG GATGCGTTGC TTTTGGCTGG AGCGAATCCG
GGACAGCTTG CTGACGGTAA AATCACTCCA TTGCTCTTGT TGCTTGGTGC GCGTGCTGAA
CGAGGCGCGG TTTGTGATGA GCAAGTGGTA CTGGCTGGAG TGGAGCGCCT CCTTGAAGAG
GGGGAGACTT TAGACGTGGT AGACACACGG GGTTTTGGTC CACTTCATTT GGCTGCGCTA
CATGGGTTGC CGCTTTTAGT GAAATGTTTG TTGCGTGCTG GCGCTGATTC AGAGCGCCGT
GACGCGTTAA ATCGTTCCCC GCGTGAGATT GCAATCATGC GCGGTTTCAT TGATGTTGCT
GGACAGTTTG AGTCGGAGCA ACTGGGTGTT GCTTCGATGG GACGGTTTTT ACGTGATTAG
 
Protein sequence
MIEILRVRTP LKLSVLVLSL AVLLHLLAGF GGVAVLALWG VQPMLALGVS WLRGTRPLPH 
SLRELWRQWL LLAVLWAAGL TVVVLPALWP LAVLCNSGSL EGALVLSAAV SVSLLVLWRT
WPLWPQIERG PCTFRSSWYV FPSHNLASWP GLGIAVLVLM IGSVAVALAW PGLLTLSLRW
VLAVVAALLA PAVHVLLQRV QSCGLTARVE PPTPREPLPE VTASPEMVPP IPSDRLVADL
YEAARTGRVD RALQLLETGA DPHALPFENA RDQRNLMVLA AILPDLRLLR ELIVRRVDVN
QRHRGMTALL AATRDSWHGR SEAVQMLLAN GADPRVVDAD RNTPLHHAAR SSDPGVAALL
RDAAAELDAL NCDGLSPLAA ACQVGNWRLA KFLLERGAQP EPIGGTPVLL AAAGTDEDDP
TGVLLLLKHK ARVDARDRLR RTALHEAAEA GHSEIVKALL EAAANLEVRD MAGRTPLLEA
ARQARIVVLE CLLSHKADRL AVDSEGRNAV FLACLSERVT LPLIRRLLEI GVPVVADKHG
HRPVDIAAKV GRWSIVSLLD PDYPLPVVVS ESVSVGGVLD RPPLTLLRDG LQLGSFGSFS
ELIELCSAEE LGTLLHDPHF ALNPDVVDWL LTHGASPTVP NSSGNVPMFS LLARGIEAVP
VLKVFLRHGV SPAGVGGLGL WLAACMQCDA ASRSLEQFAC ELLEHGADPL MPSPDGDSPL
VLTVRLGWLR LQQALLEAGV DCEVRDSYGM TALHQATVLG REAALKLLVM HGANPDARTP
DGQTSLGMAL SSGRRDLATW LDWRSWPLPR RPLRHADVPD AAMRGDTEAV RRLLDLGLPV
DAVDAQGCTA LLRAAGGGHL QVVRLLLMRG ADLQRASNNG ATPLSAAVSM RQNEIIPALL
DAGAPLEHRF PEEMTVLMLA AALGFPDIVM RLIAAGADVH ASNVQGFAAL HCAALYGFSA
RDKTRLLALL DALLLAGANP GQLADGKITP LLLLLGARAE RGAVCDEQVV LAGVERLLEE
GETLDVVDTR GFGPLHLAAL HGLPLLVKCL LRAGADSERR DALNRSPREI AIMRGFIDVA
GQFESEQLGV ASMGRFLRD