Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1185 |
Symbol | |
ID | 6120405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1249948 |
End bp | 1250967 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641649204 |
Product | phage-related integrase |
Protein accession | YP_001775766 |
Protein GI | 170730333 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGTA AGCCAATCAA AGCAGGTGCG ATTCCGAGGT TTCGCGTGCG CCCTCAGAAG TCCGGCGTGG TGTATTACTA CTACGATCAT GGCGGCAAGC CACGCAAAGA GACGCCACTG GGACGCGACT ACGGTTTAGC CATAAAGCGG TGGGCTGAGC TGGAGCATGC GCAGATCACT CCTGCAATTG CGGTAACGTT TCGCCATGTG GCCGAGCGTT ACCGCGCTGA GGTGATCCCG ACAAAGGCCC GCAGTACGCA ACAGATGCAT CACATCTATT TGAACTACCT GTTGCAGTTT TTTGACGATC CCCCCGCGCC GTTTGAGGCT ATTAGGCCGG TAGACATCCG TAAGTATCTA GATTGGCGGC CCTTTAAGGT AAGCGCTAAT CGTGAGATAT CCGTATTTTC ACATATTTGG AATTGGGCGC GGAGTAAGGG GATTACTGAT CTCGCCAACC CTTGTGCGGG CATCCGTCGT AATAAAGAGT CAGGCCGCGA TGTATACATA GACGATGCAA CGTACCGCGC TGTGTACCAA GCAGCGGATC AAACGCTCAG GGATGCAATG GACCTCGCCT ACCTGACGGG ACAGCGTGTA AGTGATGTTC TATCTATGGA TGAGCGCCAT ATTGTTAATG GCGCTTTGGA GATTTGCCAA GCTAAAACAG GTGCGAAATT AGCGATTGCG ATTACGGGTG AGTTAGCAGT TTTAATAAAG CGTATTTTTG ATCACAAGCG GGGGTTAAAG CTGCGTAGTA CACGTTTGAT TGTGGATGAA AAAGGCTTTG GGCTAGGTTG CATGGCGCTG CGCTACAGGT TCAAGAAGGC GCGTGCTGCC GCAGGGATCG CCAAGCAGGC ATTCCAATTC CGTGATCTAC GCGCCAAAGC GGCGACCGAT AAGGCGGATT TGGCGGGCGA TATACGCCAA GCGCAAGCAC AGTTGGGCCA TACCTCGGTG GTGATGACAG AGCACTATGT ACGTAAACGC AAAGGAGCGA AGGTGACACC TACGCGGTGA
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Protein sequence | MGRKPIKAGA IPRFRVRPQK SGVVYYYYDH GGKPRKETPL GRDYGLAIKR WAELEHAQIT PAIAVTFRHV AERYRAEVIP TKARSTQQMH HIYLNYLLQF FDDPPAPFEA IRPVDIRKYL DWRPFKVSAN REISVFSHIW NWARSKGITD LANPCAGIRR NKESGRDVYI DDATYRAVYQ AADQTLRDAM DLAYLTGQRV SDVLSMDERH IVNGALEICQ AKTGAKLAIA ITGELAVLIK RIFDHKRGLK LRSTRLIVDE KGFGLGCMAL RYRFKKARAA AGIAKQAFQF RDLRAKAATD KADLAGDIRQ AQAQLGHTSV VMTEHYVRKR KGAKVTPTR
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