Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1179 |
Symbol | |
ID | 6120399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1246687 |
End bp | 1247964 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641649198 |
Product | hypothetical protein |
Protein accession | YP_001775760 |
Protein GI | 170730327 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC ACGCCATGTT ATCCCCGAGC AGTGCGCATC GTTGGTTGCA CTGTCCGGCA AGCGTTCCGT TAACGCGCAC CTGCAAAGAC GACGCTAGCC CATTTGCCGA TGAAGGCACC GTGGCCCATA CAGTGGCTGC CGACGCATTA CGCACCGGCT CCGATGCCAG CGCGTACGTG GGAGCATGCC ATGAGGTAAA CGGCCACCGC TGGGAAGTCA CCGCAGAGAT GGCGGCGTAC GTGCAGGAGT ATGTGGACTA TGTACGCGCC ATTGCGGGAG TGCGCCTGGT CGAGCAGCCC CTACGCATTG CCTCCATCAC TGGGGAGCAA GGCGCTAAAG GCACCGCTGA TATGGTGATT TTAGCGGGGG ATGCGTTGAC CATCGTTGAT CTCAAATACG GCAGAGGCGT CAAAGTCTTC GCCGAAGGCA ATGAGCAATT GCAGCTGTAT GCGCTGGCAG CGCTGCAAGA ATTTGCAGGG GTGGAAGCCT TCCAGCACGT GCGGCTAGTG ATCGTGCAAC CACGGCTCGG ACATGCCGAT GAGTGGGTGG GCACCCTCCC CCAGATGGAG GATTTTAGGC AGAAGGTTGC GCAAGGCGCA GCGCGGTGTA GGGCTGCGAT GTGGCACTAC AACAACGTAG GCGAATTACC TTCAGAGTAT TTCGGCCCCG CAGAAAAACC ATGCCGATTT TGCAAGGCCA AAGCGAGCTG CCCTGCGTTG GCCACGCATG TACTGAACAC GGTGGCAGAT GATTTTGTTG ATCTCACAAA ACCCATTGTC CCGCAGCTCA GCCACGCGGC CCTGCGCACA TTTGATAACA CCACGCTGGC CTGCCTGTTT GGCGCAACAG AGTTAATCGA ATCCTGGTGC AAAGCTGTCC GTGCCAAGGC AGCAGCGGAG TTGCTTTCAG GCCAGCCCGT GCCTGGATAC AAGGTGGTTC AAGGCCGACA GGGGGCGCGC CGTTGGGCGG ACATGACCGC CGCTGAAGCC ATGCTCAAAC AGCTGCGCAT CAAATTCAAA GACATGTACG ACGTGTCTCT CATCAGCCCC ACGACCGCCG AGAAACTCCA TCAGGCCGGA GTCATCGGTG ATCGCCAGTG GCCAAAGCTC CAACCGCTCA TTCATAGGGC AGCAGGGACG CCCGTTGTTG TTCCCACATC GGATAAACGC CCCCCGCTCG CCCTTCAAGA CGCGACGGAT TTCCAGGACT TGAGCGACAT GCCCATCCCC CCACTCCCAG ACACAGCACC CTCACTTCAA TCTCAGGAGA CACCGTAA
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Protein sequence | MSQHAMLSPS SAHRWLHCPA SVPLTRTCKD DASPFADEGT VAHTVAADAL RTGSDASAYV GACHEVNGHR WEVTAEMAAY VQEYVDYVRA IAGVRLVEQP LRIASITGEQ GAKGTADMVI LAGDALTIVD LKYGRGVKVF AEGNEQLQLY ALAALQEFAG VEAFQHVRLV IVQPRLGHAD EWVGTLPQME DFRQKVAQGA ARCRAAMWHY NNVGELPSEY FGPAEKPCRF CKAKASCPAL ATHVLNTVAD DFVDLTKPIV PQLSHAALRT FDNTTLACLF GATELIESWC KAVRAKAAAE LLSGQPVPGY KVVQGRQGAR RWADMTAAEA MLKQLRIKFK DMYDVSLISP TTAEKLHQAG VIGDRQWPKL QPLIHRAAGT PVVVPTSDKR PPLALQDATD FQDLSDMPIP PLPDTAPSLQ SQETP
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