| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1092 |
|---|
| Symbol | |
|---|
| ID | 6120717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1174995 |
|---|
| End bp | 1175825 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641649115 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_001775679 |
|---|
| Protein GI | 170730246 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00970061 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTATT TTTTATGGGA TGATGCTGCA CTGCGCTGGT TATCTGAAAA ATCTCGTAAA
GCAACAGCAC ATGAAGACGC CGCTAAATTA CGCTGGCTGG CTTCTTACTT TGCTGGAAAG
AAGTTAGCTG CTATTGATAG CGATTTAATC TTGCGTGTGG CTACGCTAAA AGCGGCTGAG
ACTTCCCCAT CCACTGCAAA TCGTTATTTG GCGTTGATTC GTTCTATCCT GCGCCGTGCG
TTTGATATTT GGCTGTGGAT TGATCGGTGT CCTCATATTT CACTGTTTCC AGAACCGACA
AAACGGGTTC GCTGGTTGAC GTCTGTTCAA GCTCGCTCGT TGCTGTCCGA GCTGCCATTG
CATCAGCGCG CTATGGTTAT TTTTGCTTTG TCAACCGGAT TGCGTCAGGC CAATGTATTG
AAATTACGTT GGGATCAGGT CGATCTTGTC CGTAAGGTCC TACGTATTCC TGCTGATCAG
GCGAAGGGAC GGCAGGCGAT CCGGATTCCG TTATCGCTGC ATGCTTTGCA AGTGCTTCAG
GCGCAACGTG GACAGCATTA TGAATGGGTG TTTACTTATT GTGGTCGTTC TATTCGTTGG
GTAAATACTC GTGCTTGGCA TCAGGCGTTG CAGCGGGCAG GGATACAGGA TTTTCGTTGG
CATGATCTGC GGCATACCTG GGCGTCTTGG CATGCGCAAT CGGGGACTCC GCTGTATGTG
TTGCAAGATC TGGGCGGATG GCAGTCTGAA TCAATGGTGC GCCGCTATGC ACATTTGACG
CCCAGTCATT ATTCTGCTTA TGCAGAGGCG GTTACGGAGT TTCTTCCATA G
|
|---|
| Protein sequence | MSYFLWDDAA LRWLSEKSRK ATAHEDAAKL RWLASYFAGK KLAAIDSDLI LRVATLKAAE
TSPSTANRYL ALIRSILRRA FDIWLWIDRC PHISLFPEPT KRVRWLTSVQ ARSLLSELPL
HQRAMVIFAL STGLRQANVL KLRWDQVDLV RKVLRIPADQ AKGRQAIRIP LSLHALQVLQ
AQRGQHYEWV FTYCGRSIRW VNTRAWHQAL QRAGIQDFRW HDLRHTWASW HAQSGTPLYV
LQDLGGWQSE SMVRRYAHLT PSHYSAYAEA VTEFLP
|
|---|
| |