Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1035 |
Symbol | gidB |
ID | 6120660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1124798 |
End bp | 1125514 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649065 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001775629 |
Protein GI | 170730196 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.943257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTTT GCCGTGTGCT CGATATAGGA TCTCAATGTT TTTACTGGGG CATGTTCCAC AACGAAGCCA ATTTGCCGAT GAATGATTCT TCTTTTTCCC CAGAAGTGAC AGCAGACTTG GAATATGGTC TGGATATATT GGAACTGGAC CGTGCCTATG TTGTTCCGCT GTTGGCCTAT TTGGCACTGC TCATACGCTG GAACCGTACC TACAATTTGA CTGCGATCCG TGATCCACGG GAGATGGTGG TCCGTCATTT GCTCGATTCG TTGGCGATAC AGCGTTATGT GACTGTCGGC CGCCTTGCTG ACCTTGGTTC TGGTCCAGGA TTGCCTGGGA TTCCGCTAGC GATTAGTTGC CCGCCTCTAC AGGTGACATT GGTGGAAAGC AATGGCAAGA AGGCGCGCTT TCTACGGGAG GTGGTGCGTC AACTTGGTTT GAGTAATGTG GGTGTGTCTG AGGTGCGTGC CGAGGCGTTG GACGAAGCTC TCATGTATGA GCATCTCACT GCACGTGCCT TGGATACGTT AAACGGCATT GTTACGGTTG GCGGGCATCT GCTCAAATCT GAGGGGACGT TGCTGGCGAT GAAGGGTGCC TATCCTCATG AGGAGATCGC CATGTTGCCG CCCCATTGGG TTGTCGAAGC AGTACACCGA TTGCAGGTCC CCAAGCTAAC CGGAGAGCGG CATTTGGTGA TAGTACGGAA GAGATAG
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Protein sequence | MIFCRVLDIG SQCFYWGMFH NEANLPMNDS SFSPEVTADL EYGLDILELD RAYVVPLLAY LALLIRWNRT YNLTAIRDPR EMVVRHLLDS LAIQRYVTVG RLADLGSGPG LPGIPLAISC PPLQVTLVES NGKKARFLRE VVRQLGLSNV GVSEVRAEAL DEALMYEHLT ARALDTLNGI VTVGGHLLKS EGTLLAMKGA YPHEEIAMLP PHWVVEAVHR LQVPKLTGER HLVIVRKR
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