Gene Xfasm12_1019 details

Gene Information

• Locus tag: Xfasm12_1019
• ID: 6121503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1100347
• End bp: 1102389
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641649050
• Product: putative methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001775614
• Protein GI: 170730181
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.58121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAGCT CCCCGAATGT CCGCAACAGC CAAAAGTTTG ACGGCCCGAG TACCAACTTT 
TGGATTGGTT TGTTCTTATT GTCGATGATT GTATTTAGCG CCAATATCGG TGTGGCAACT 
TGGCAAGGCA GGCGGCTTGC TGGGGCCAGT GCCGATGTGG CTAACTTGCA GGTGTTGTCG 
CAGCAGTTGG TTAGTCAGGG GCGCGAAGCG GTCGCTGGAG ATTCAAAAGC ATTTTCCAAT 
TTTAAGGAAA TCAAAAGCAA GATTGAAGAT ACTGTCAAGA AACTTGAGGC CCGCTATAAC 
AATGAAAGTT CGGTTTCTGA TGCTTTGTTC CAACTGAAAA ATACTTGGGA GCCCTTGAGT 
AAGAATGCAA AGCAGTTAAT TGATAGCGAA TCGGCAACAT TAGTTTTAGC GAGTAACGCT 
GATCGCTTCG TGAGTAATGT GCCTCAGCTT CAGGCACAAT TAAACGAGGT GGTACGTGCG 
ATGACTGCTA GTGGCGCGCC ACCCTCGCAG TTCTACAATA CACTGCAGCA GGTAGTAGTG 
GCCGGCACTA TGGCGCGGCG TGTCGCTGAG ATGCGTACTT CCGGGGTTGG GGCAGCCGCA 
GCCGGCGATG CACTGGCGCG GGATTCTGTG ATGTTCACAA GGATGCTGGA AGGTTTGCGC 
AATGGCAATC AGGAGTTAGG GATATCTCCT GTTCGCAATG ATGCCACGCT GTCAGCACTG 
ACAAAGTCGC AGTCCCTGTG GATAACAATG AAAAAGGACG TTGATAAGAT CCTGGCGACT 
TCGCATCAGC TATTTGCTGC GCAATCCTCT GTCGATGCAT TGGTGAATGG CTCAGGTAAA 
TTATTGGAGG ACAGTAATAA ATTATTTAAT GCGTTTTCGA CATTTGGGGT TGGCTCGGTA 
CGTGATACAC GTATTTTCCC CAATTTCTGG CTCACTGTGA TATTTGGGTT GCTGTCTCTA 
GTGTCGATTG TTGGTCTGGC CTGGAGTACG GTGATTTCCC GATCACGCGA ACAAGAGCAG 
CGTTATCAAG CTCAGGTGGA GTTTAATAGC CGTAACCAGC AGGCAATCAT GCGATTGCTG 
GAAGAGATTA TTTCTATCGG TGAAGGTGAT CTAACCGTGA AGGCTTCGGT CACCGAGGAA 
ATGACTGGGG CGATAGCCGA CGCGATCAAC TGTGCTGTTG ATGAACTGCG TCAATTGGTC 
GCCACGATCA ATACTACTTC GGCCAAGGTT GCGGTATCGG CGCATGAAAC TCAGACCACT 
GCGATGCGCT TGGCGGAGGC CGCAGGCCAT CAAGCCAATC AAATCACCAC AGTCTCAGAG 
CGAATTAGCG AGATTGCGGC TAGTATCGAA CAGGTGTCAC GCAACTCCGC AGAATCGGCA 
GAAGTAGCGC AGCGTTCTGT TGTGATTGCA GCAGAGGGTG CTGGTGTAGT CCGTGAAACT 
ATCCAGGGCA TGGACCAAAT CCGCGATCAG ATCCAGGAAA CATCAAAACG TATCAAGCGT 
CTGGGTGAGT CGTCTCAAGA GATTGGTTCA ATCGTAGAAT TAATTAACGA TATTTCTGAA 
CAGACCAATA TTTTGGCGCT TAATGCAGCA GTGCAAGCAG CTTCTGCTGG CGAAGCAGGA 
CGTGGTTTCG CCATTGTTGC CGATGAAGTC CAGCGTTTAG CTGAACGCAC CTCTAGTGCA 
ACCCGTCGCA TCGAGAGTTT GGTACGGGCA ATTCAGGTTG ACACTAACGA GGCTGTTAGC 
TCAATGGAGC AGACGACTGC TGGAGTAGTA TCTGGCGCGC GCTTGGCTGA AGATGCAGGT 
ACTGCATTGA TTGAGATTGA ACACGTATCT AACACGCTTA ACCATTTAAT TAAAAACATT 
TCCATTGCTG CTCATCAACA AGCAGCTGCT GCTACTGACA TCACTCAAAC GATGGGTGTA 
ATTCGCCAAA TTACTTCTCA GACCTCACAA GGTGCTGGGA AGACTGCTGA ATCGATCGGT 
CGTTTAGCTG GGTTGGCTGC TGAATTGCGT CGATCAGCAG CCAACTTCAA ATTGCCAGCT 
TGA 

 

Protein sequence

MGSSPNVRNS QKFDGPSTNF WIGLFLLSMI VFSANIGVAT WQGRRLAGAS ADVANLQVLS 
QQLVSQGREA VAGDSKAFSN FKEIKSKIED TVKKLEARYN NESSVSDALF QLKNTWEPLS 
KNAKQLIDSE SATLVLASNA DRFVSNVPQL QAQLNEVVRA MTASGAPPSQ FYNTLQQVVV 
AGTMARRVAE MRTSGVGAAA AGDALARDSV MFTRMLEGLR NGNQELGISP VRNDATLSAL 
TKSQSLWITM KKDVDKILAT SHQLFAAQSS VDALVNGSGK LLEDSNKLFN AFSTFGVGSV 
RDTRIFPNFW LTVIFGLLSL VSIVGLAWST VISRSREQEQ RYQAQVEFNS RNQQAIMRLL 
EEIISIGEGD LTVKASVTEE MTGAIADAIN CAVDELRQLV ATINTTSAKV AVSAHETQTT 
AMRLAEAAGH QANQITTVSE RISEIAASIE QVSRNSAESA EVAQRSVVIA AEGAGVVRET 
IQGMDQIRDQ IQETSKRIKR LGESSQEIGS IVELINDISE QTNILALNAA VQAASAGEAG 
RGFAIVADEV QRLAERTSSA TRRIESLVRA IQVDTNEAVS SMEQTTAGVV SGARLAEDAG 
TALIEIEHVS NTLNHLIKNI SIAAHQQAAA ATDITQTMGV IRQITSQTSQ GAGKTAESIG 
RLAGLAAELR RSAANFKLPA