Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0992 |
Symbol | |
ID | 6121476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1068670 |
End bp | 1072242 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641649028 |
Product | surface protein |
Protein accession | YP_001775592 |
Protein GI | 170730159 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTC ATACTGCACT GCCCATGGTT CGGTTGGGTG GAATCGAAGG TGTTGATCCA TTATTTTTGC CGAAATACAA GATCGGTCAG TCGCTGCAAC ACGCAGTGAT GACGTCAGCA GCTTCAAGTA AAAAAGGTAC GCAGCCACGA TGTTCCAACA ATGCGATGAC AGCTAAGCGT AGCGCGAAAC TGCACGACCG GAGGCAGTTG CATATTGTCT TATTGACAGT GCTTGCAGCC TCAACGGGAT ATACGGGGAA AGTAGCAGCT CAAGTCTATG TAAATTCCGA CTCGACTGAA AATTGCGTAG AAATACTTGG CGACAGTAGT CAGACATCCT TCATTCATAG TGCTTCTAAC GATAAATGCA AGCCAGATTT CACGCAAACA GAGTATTCCC TGTTTTATGA CTATAGAAAC CTGGTTCTTG GTGGGTCCTT ATATGTCAAT GAGGGTAAAC TCGGGCTAGT CGATATTTCT GGTGCAACTT ATTCTATGCG CCTAGGCAGC ATTGCTACCA TGAATGGCTC GGCTGGCATA GATTCGATTG CCATCGGTTC AGGGCAAGGT TCCAAAACGG ACGGGAATAC CAGCGGCGCC ACTGTAGCAC AGGGGCTGCG TTCGATTGCG ATTGGTACTA CGGCCCGTTC GCAATCTCAA GATACGATTT CTATAGGGAC CGGTGCATCC ACTACAGGCA ATTTTGCGAT AGCGATAGGT AATGGAGCAT TGACATCAAT TGCCAATGGG ATAGCGCTTG GTGCATCAAG CAGTGTCACC ACAAGAGGAG GCGTGGCACT GGGACAAGGC TCGCTGGCTG CGACCGCTTC TGGCATTACT GGCTATGATC CGGTCACCAA GAGCACCTCG ACTCTTTCCA CGTCAATGTG GAGAAGCACG CTGGGGGCAG TCAGTATCGG TAATATAACC TCTAGCACCT CCCAGACACG TCAACTTACA GGATTGGCGG CAGGTAGGTC GGATACGGAT GCGGTGAATG TTGCCCAGCT GAAGTTGCTT GCTGAATCTG TGGGTGGTGG TTGGAATTTG ACTGCTTCTG GAGCCAACAG CAGTAATGTG GCGCTGGGTG AGTCGGTGGA TCTGAAGAAT AGTGATGGGA ACCTCTTAAT CACCAAAACA ACCGACAGCA ATGATGTGAC TTTTAATTTG GCCACTGCTT TAAAAGTGGA CAGTTTGACC ACTGGCAACA CGGCGATGAC GACTGATGGT GTGGCGGTGG GTAGTAACGT GAAGTTGGGC TCGACGGGAT TAATTATTAC AGATGGTCCG TCTGTGACCA GCTCGGGCAT TAGCGCCGGT AACCAAAAGA TAACGAATGT TGCCGTAGGT ACTGCGGATA CCGATGCCGT CAACTTTAGC CAGTTGCAAG CGGTGAGCAG TACGGCCAGT AAGGGTTGGA ATTTGCTGGC TTCTGGAGCC AACAGCAGTA ATGTGGCGCC GGGTGAGTCG GTAGATTTGA AGAATAGTGA CGGGAACCTC TTAATCACCA AAACAACCGA CAGCAATGAT GTGACTTTTA ATTTGGCCAC TGCTTTAAAA GTGGACAGTT TGACCACTGG CAACACGGCG ATGACGACCG ATGGTGTGAC GGTGGGCAAG AGAGTGACCT TGGATTCGAC AGGATTAGTG ATTGCGGAAG GTCCCTCGGT AATCAGTTCG GGCATTAATG CGGCCGGCCA AAAGATCATG AATGTTGGAA CGGGTACTGC GGATACAGAC GCCGTCAACT TCAGTCAGCT GCAAGCGGTG AGCGATACAG CAAGCAAGGG CTGGAATTTG CTAGCTTCTG GAGCCAACAG CAGTAATGTG GCGCCGGGTG GGTCGGTGGA TCTGAAGAAT AGTGATGGGA ACCTCTTAAT CACCAAAACA ACCGACAGCA ATGATGTGAC TTTTAATTTG GCCACTGCTT TAAAAGTGGA CAGTTTGACC ACTGGCAACA CGGCGATGAC GACTGATGGT GTGGCGGTGG GTAGTAACGT GAAGTTGGGC TCGACGGGAT TAGTTATTAC AGATGGTCCG TCTGTGACCA GCTCGGGCAT TAGCGCCGGT AACCAAAAGA TAACGAATGT TGCCGTAGGT ACTGCGGATA CCGATGCCGT CAACTTTAGC CAGTTGCAAG CGGTGAGCAG TACGGCCAGT AAGGGTTGGA ATTTGCTGGC TTCTGGAGCC AACAGCAGTA ATGTGGCGCC GGGTGAGTCG GTAGACCTGA AGAATACCGA TGGAAACATC GTGATCAGCA AAGAAAGCGG CAGCAATGAT GTGCTTTTCA ATCTGTCCAG CAGTTTGAAA CTGGACAAAT TGACCGTTGG CGACACGGTG ATGACGACCA ATGGTGTGAC AGTGGGGAGT GGCGTGACGT TGGGTTCGAT GGGATTAGTT ATTACGGATG GTCCCTCGGT GACCAGTTCT GGTATTAATG CTGGCAGCCA AAAGATTACG AATGTTGCCG CAGGTACTGC GGACACGGAT GCTGTTAATC TTAGCCAACT TAATACTGCA ATGGCGAGCT CTGGCGCTAA ATCAGTCCAT TACTACAGTA CGTATGATGG TGGTACCCAA GGAGGTAACT ACAATGGTGA TGGTGCGACA GGCAATGGGT CTATAGCCGT TGGTGTTGGA ACGCTTGCAT CCGCTGAAGG AGCGACAGCA ATGGGTTCAG GGGCGGCTGC CAGTGGGAAA GGCTCCACGG CGATCGGTCG TAACGCAGTT GCCAGCGCTG ATGGTAGCGT GGCGTTGGGC GATGGTGCAA AGGATGGCGC GCGTGGGGCA GAGAGTTACA CCGGTAAATA TTCAGGCGTA CAGAATAATA CGGTGGGAAC TGTTTCGGTA GGTGATGCTT CCAAGGGTGA AACCCGCACA GTGAGTAATG TGGCTGATGC CAAAGAAGCG ACGGATGCGG TGAATTTGCG TCAGCTTGAT CAAGTGGCTC AAGATGCCAA TCGTTATGTT GATAACAAGA TAGAAAGCCT TAGCGAAGGG CAGACTTTCG TTAAGGTGAA CAGCGTGAAC AATAGTGCCA CTCCTATTGC AGCTGGAGTC GATGCAACAG CGATTGGTGT CGGTGCCACC GCTTCGGGTG CCGATAGCAT TGCGATGGGT AATAAAGCCA GTGCGTCTGC TGACAATGCG GTTGCCATTG GTAACCATTC AGTAGCCGAC CGTGCAAACA CTGTTTCTGT AGGATCGGCT GGTTCTGAGA GGCAGGTGAC GAATGTAGCC GCTGGCACTG CTGATACTGA TGCGGTCAAT GTAAGCCAAC TCAATCAAGG CTTGATCACT GCCAAACAGT ACACGGATGG GGTCGTAGGG AGTCTTCGTA GGGATACTGA CGGTGGTGTG GCGGCAGCAA TTGCAACAGC AAATCTCCCA CAGGCTTATA TTCCGGGACG CGGGATGACC TCCGTAGGCG TTAGTAGTTA CCGAGGGCAA TCTGCCATTG CGGTGGGTGT TTCTTCGGTT TCTGAAAGCG GACGTTGGGT GTTCAAGTTC AGCGGTAGTG CAAATACCCG TAGTCAAGTG GGTATTGGTG CAGGTGTGGG TTATCAGTGG TAA
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Protein sequence | MQIHTALPMV RLGGIEGVDP LFLPKYKIGQ SLQHAVMTSA ASSKKGTQPR CSNNAMTAKR SAKLHDRRQL HIVLLTVLAA STGYTGKVAA QVYVNSDSTE NCVEILGDSS QTSFIHSASN DKCKPDFTQT EYSLFYDYRN LVLGGSLYVN EGKLGLVDIS GATYSMRLGS IATMNGSAGI DSIAIGSGQG SKTDGNTSGA TVAQGLRSIA IGTTARSQSQ DTISIGTGAS TTGNFAIAIG NGALTSIANG IALGASSSVT TRGGVALGQG SLAATASGIT GYDPVTKSTS TLSTSMWRST LGAVSIGNIT SSTSQTRQLT GLAAGRSDTD AVNVAQLKLL AESVGGGWNL TASGANSSNV ALGESVDLKN SDGNLLITKT TDSNDVTFNL ATALKVDSLT TGNTAMTTDG VAVGSNVKLG STGLIITDGP SVTSSGISAG NQKITNVAVG TADTDAVNFS QLQAVSSTAS KGWNLLASGA NSSNVAPGES VDLKNSDGNL LITKTTDSND VTFNLATALK VDSLTTGNTA MTTDGVTVGK RVTLDSTGLV IAEGPSVISS GINAAGQKIM NVGTGTADTD AVNFSQLQAV SDTASKGWNL LASGANSSNV APGGSVDLKN SDGNLLITKT TDSNDVTFNL ATALKVDSLT TGNTAMTTDG VAVGSNVKLG STGLVITDGP SVTSSGISAG NQKITNVAVG TADTDAVNFS QLQAVSSTAS KGWNLLASGA NSSNVAPGES VDLKNTDGNI VISKESGSND VLFNLSSSLK LDKLTVGDTV MTTNGVTVGS GVTLGSMGLV ITDGPSVTSS GINAGSQKIT NVAAGTADTD AVNLSQLNTA MASSGAKSVH YYSTYDGGTQ GGNYNGDGAT GNGSIAVGVG TLASAEGATA MGSGAAASGK GSTAIGRNAV ASADGSVALG DGAKDGARGA ESYTGKYSGV QNNTVGTVSV GDASKGETRT VSNVADAKEA TDAVNLRQLD QVAQDANRYV DNKIESLSEG QTFVKVNSVN NSATPIAAGV DATAIGVGAT ASGADSIAMG NKASASADNA VAIGNHSVAD RANTVSVGSA GSERQVTNVA AGTADTDAVN VSQLNQGLIT AKQYTDGVVG SLRRDTDGGV AAAIATANLP QAYIPGRGMT SVGVSSYRGQ SAIAVGVSSV SESGRWVFKF SGSANTRSQV GIGAGVGYQW
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