Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0960 |
Symbol | |
ID | 6121444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1039558 |
End bp | 1040205 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648999 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_001775563 |
Protein GI | 170730130 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0969642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG CAAAACGGCG CGCCGCCGAA AAGGCCATAG AATACGTCGA GAACGATATG ATTATCGGCG TCGGCACCGG CTCAACAGTC GCCTACTTCA TCGACGCACT AGGACGCACC CCAAAACGCA TCAAAGGTGC AGTATCCAGC TCCGAACAGA GCACAGCACA TTTAAAACAA CACGGAATTG AGGTCCTGGA ACTCAATCAT ACCGGCACAC TCCCACTCTA TGTGGACGGT GCAGACGAGT GCGACCCGTA CAAACGCCTT ATCAAAGGAG GCGGCGCATC ATTAACACGC GAGAAGATCA TCGCTGAAGC AAGCAAACAA TTCATTTGTA TCATCGACCC AAACAAACAG GTAGCAACAC TAGGCAAGTT CCCACTACCC ATCGAAGTGA TCCCAATGGC ACGCAGCTTG GTTGCAAGGC AAATCATGGC ACGTACCGAC GGTCAACCAG TATGGCGTGA AGGGGTCATT ACCGATAACG GCAACGTTAT CCTGGATGTA CATCACTTAT GCATCACCGA CCCGGTAAAG CTAGAGCAAG AACTCAATCA AATCCCAGGG GTCGTCTGCG TCGGCCTGTT CGCCCGTCGC TGTGCGGACC TAGTTATCAT CGGCAGCGAA CCGCCGCACA TACTCTGA
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Protein sequence | MSEAKRRAAE KAIEYVENDM IIGVGTGSTV AYFIDALGRT PKRIKGAVSS SEQSTAHLKQ HGIEVLELNH TGTLPLYVDG ADECDPYKRL IKGGGASLTR EKIIAEASKQ FICIIDPNKQ VATLGKFPLP IEVIPMARSL VARQIMARTD GQPVWREGVI TDNGNVILDV HHLCITDPVK LEQELNQIPG VVCVGLFARR CADLVIIGSE PPHIL
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