Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0862 |
Symbol | |
ID | 6121424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 931312 |
End bp | 932157 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641648914 |
Product | general secretory pathway protein K |
Protein accession | YP_001775479 |
Protein GI | 170730046 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00384723 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGGCGCG CGCGTGGAGC TGCATTGATC GTAGTGTTAT GGCTGGTCAT GCTGTTGGCG GCCATGATTG GTGCGTTTGC TCTCTCGGCT CGGGTCGAGC ACCTTCAGGG GGCGGTTCTA GTCAGTAGTG CCCAAGCTCA GGAGGTCGCA CGTGCTGGGT TGGAATACGC GGTGTCTCGG CTTCAGGACA GCGATTCGGT TCAGGTGCGT TGGATCCCCG ATGGCCGCCC CTACTCTTGG CATTACGCAG ATGCCACGCT GGAGATGCGG ATGATTGATG AGAGCGGTAA GGTTGATTTG AACGTTGCAG ATCTGCAACT GCTGATCGCT TTGATTCAGG CATTGGGTGT CGACGTTGCG CGTGCTGCGC GTCTGGCTGG AGCGATCATC GATTGGCGTG ATACCGATCA TTTGGTGTCT CCTGGTGGCG CCGAAGATTC AGATTACGCC GCAGCTGGTT TGCCCTATGG AGCGAAGGAC AATCCTTTCC AGAGCATCGC TGAGTTGCGT TTGGTGTTGG GAATGGATAG GGATCTGTAT CGACGGATGC TGCCTAACAT CACTATTTAC AGTGGGAATT TGCAGCCGGA AATACGTTAT GCGCCGGTCC CGGTGTTGAC TGCATTGGGG CAGGATGTTG CGGTGGTTCT GGCCAAGCGT CAGCAGTTGT CTCCGTCAGA TGTGAGCAAA CAGATGGGCA GTGGCACTTA CAGTATTGAG AGCAAGGTAC GGCTGGCTCA GGGGCGCGAA GCCGTGTTGC GTGCAGTCGT CCGCATGGGA GGGGGGCGTA TGCCAGGAGC AACTTACACC ATTTTGCATT GGGAAGAGGG TATCGCATGG CAATGA
|
Protein sequence | MRRARGAALI VVLWLVMLLA AMIGAFALSA RVEHLQGAVL VSSAQAQEVA RAGLEYAVSR LQDSDSVQVR WIPDGRPYSW HYADATLEMR MIDESGKVDL NVADLQLLIA LIQALGVDVA RAARLAGAII DWRDTDHLVS PGGAEDSDYA AAGLPYGAKD NPFQSIAELR LVLGMDRDLY RRMLPNITIY SGNLQPEIRY APVPVLTALG QDVAVVLAKR QQLSPSDVSK QMGSGTYSIE SKVRLAQGRE AVLRAVVRMG GGRMPGATYT ILHWEEGIAW Q
|
| |