| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0742 |
|---|
| Symbol | |
|---|
| ID | 6120504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 801017 |
|---|
| End bp | 802018 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641648800 |
|---|
| Product | trans-hexaprenyltranstransferase |
|---|
| Protein accession | YP_001775365 |
|---|
| Protein GI | 170729932 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.247757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG CCACCACTCC TCTCCATACC GCCCTAAGCC TTCCCCAGAT TCAATCCTTC
GCAGCATCAG ACATGGCTGC AATCGATACG CTGATCCACG ACCGCCTGAC CTCAGACATT
GTGCTGATCA ATCAAATTGC CGATCACATC ATCTGCTCAG GTGGCAAACG CCTGCGCCCC
ATGCTAACGA TGTTAGCTGG CCACGCCATC GGCCCCACAG GCCCTCATCA CCACCAACTG
GCGGCCATCA TTGAGTTCAT CCACACCGCC ACACTGCTAC ATGATGATGT GGTCGACGGA
TCGGAACTGC GCCGCAGTCG CAGTACCGCA AATGCACTAT GGGGCAATGC ACCCAGCGTT
CTAGTCGGCG ATTTTCTATA TTCGCGCAGC TTCCAACTGA TGACCGAATT GGCCAACCTA
GAAGTCATGC AGATATTGGC TGAAACCACC AACCGTATCT CTGAAGGCGA AGTACTGCAA
TTGTTGCACG TACACAACCC GGATACCGAC GAAACCACCT ACCTAAGCGT GATCGAGCGC
AAAACGGCAA TATTGTTTGC TGCCGCAGCA CAACTCGGAG CACTCGCATC CCATGCCGAT
ACGCAGACAC AGACACGCAT GTACGAATAT GGAATGCAAT TGGGCTATGC ATTCCAAATC
ACCGACGATG TACTCGACTA CACCGCCAAC AATAGCCAAC TGGGCAAAAA TCTCGGTGAC
GATCTCGCCG AAGGCAAAGC CACCTTACCA GTGATCCATG CGATGACACA CTCAGACGCA
GCCACATGTG AACGTTTGCG CATGATCATC AGCAAAGGCG ATAGCGATGC AATGCCAGAA
GTGCTGAACG CGATCCGTAC AACTGGCAGC TTGGACTACA GTCGGCAACG CGCCAGCGCG
TATGCGGCGA CCGCCGAACG CGCACTAGAC GGCCTGCCCG AAACCGAAGC AGTGGCCGCG
TTGCGCGGCT TGGCCCGCTA CGCTGTCCAA CGAACCTACT GA
|
|---|
| Protein sequence | MSIATTPLHT ALSLPQIQSF AASDMAAIDT LIHDRLTSDI VLINQIADHI ICSGGKRLRP
MLTMLAGHAI GPTGPHHHQL AAIIEFIHTA TLLHDDVVDG SELRRSRSTA NALWGNAPSV
LVGDFLYSRS FQLMTELANL EVMQILAETT NRISEGEVLQ LLHVHNPDTD ETTYLSVIER
KTAILFAAAA QLGALASHAD TQTQTRMYEY GMQLGYAFQI TDDVLDYTAN NSQLGKNLGD
DLAEGKATLP VIHAMTHSDA ATCERLRMII SKGDSDAMPE VLNAIRTTGS LDYSRQRASA
YAATAERALD GLPETEAVAA LRGLARYAVQ RTY
|
|---|
| |