Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0729 |
Symbol | trpA |
ID | 6120491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 781493 |
End bp | 782299 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641648788 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001775353 |
Protein GI | 170729920 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGTA TAGACGAAAC ATTCCGCCGT TTAAGGGCGC AATCGCGTAA GGCGTTGATC CCTTTCATCA CTGCTGGCGA CCCCTCTTTG GAGGCGGCTG TTCCGGTGAT GCATGCTTTG GTCCGTGCGG GGGCGGATGT GATTGAGTTG GGTGTGCCGT TTTCGGACCC GATGGCGGAT GGTCCGGTGA TTCAGCACAG TTCCGAGCGC GCGTTGCAGC GTGGTGTGGG TTTGGCCTAT GTGTTGCAGA CAGTCGATGT GTTCCGTCAG AGTGATGCAG TGACGCCGGT GGTCTTGATG GGCTACCTCA ATCCTTTGGA AATCTATGGC ATTGCGCGTT TTACACAGCA GGCACTGGCT TCTGGAGTGG ATGGGGTGCT GCTTGTGGAT CTTCCTCCGG AAGAGGCGGA CGAGATCCGC GCGATCTTTT CGGCGGCTGG TTTGGCACTC ATCGTTTTGG CATCTCCGAC GACCTCTGCC TCCCGTCTGG CCACGTTGAG TGGGGTTGCC CAGGGGTACT TGTATTACGT GAGTTTTGCT GGCGTGACTG GTGCTGATCG GCTTGATGCG CAGTCAGCCG GTGATCGCTT GCGTGGATTA CGTGCGCAGA CTCAAGTCCC GGTGGTGGTT GGCTTTGGTA TCAGGGATGC GGCCAGTGCT GTGGTGATGG CGGTGGATGC GGATGGGGTG GTGGTTGGCA GTGCCTTGGT GACGGCCTTA AGTGATGCTC CGGATGTGGA CACCGCCTGC CGGCGTGCTG ATGCGTTTTT GGCACCGTTG CGTCAGGCGT TGGATGCGGT GAAGTAG
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Protein sequence | MHRIDETFRR LRAQSRKALI PFITAGDPSL EAAVPVMHAL VRAGADVIEL GVPFSDPMAD GPVIQHSSER ALQRGVGLAY VLQTVDVFRQ SDAVTPVVLM GYLNPLEIYG IARFTQQALA SGVDGVLLVD LPPEEADEIR AIFSAAGLAL IVLASPTTSA SRLATLSGVA QGYLYYVSFA GVTGADRLDA QSAGDRLRGL RAQTQVPVVV GFGIRDAASA VVMAVDADGV VVGSALVTAL SDAPDVDTAC RRADAFLAPL RQALDAVK
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