| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0586 |
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| Symbol | |
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| ID | 6120350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 640264 |
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| End bp | 645189 |
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| Gene Length | 4926 bp |
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| Protein Length | 1641 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641648655 |
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| Product | hypothetical protein |
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| Protein accession | YP_001775220 |
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| Protein GI | 170729787 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAGACC GTGTTGCAAT GATGTTGCGT CCGTTGGTCT GCGGTTGGAT CCCACGTGCT
GTGTTGTTGT TGACGGTTGC TTTTTCATTC GGCTGTAACC GCAACCACAA CGGCCAGTTG
CCGCAGAGCA GTGGTGAGCC GGTTGCTGTG GCAAAAGAGC CGGTCAAGGG GTTCGTCCTA
GTACGTGCTT ATCCGGATCA GCATGATGGT GAATTGGCGC TGGCACTGGA ATTCTCACAG
CCGTTGGCAG CGACGCAGGA ATTCGACACG TTGGTCCGTT TAGAGCAGGG CAGCGGGAAT
CATGATGGGG GTTGGTCGCT GTCCGATGAC GCCAAGACGC TCCGTTATCC TTATGTTGAG
GCAGATAAGC ACTATACGGT GTTGATTTCC GGGGATTTGC TTGCTGCGAC TGGGAGCCGT
TTGGGTAAAA GTCGCAAGGA GCCGGTGTAT ACCGGTGAAC TGGATCCAGT GGTTGGCTTT
GCTTCCCGGG GAAGCATTCT TCCGGCGCGC GGCAGCCGTG GTGTGCCGGT TGTTTCGGTC
AACGTTCCTG AGGTGGATGT TGAGTTTATG CGCGTGCGCG AAAAGGCGTT ACCGGCATTT
CTGGCTCGGT ACCATAATGC CGGGCAGCGT AGTAGTTGGG AGTTGAGCAA TCAAGGCAAT
TCCAGGAAGC GCTTATCGGA GTTGGCTGAT CCCGTCTACG TGACCCGCTT CGTACTCGAT
GGTAAGAAAA ACGAACGCGC GCTGACCTAT CTGCCGATCC AGAACATCAG GGAGCTGCGG
GAGCCAGGGC TGTATTTCGC CGTGATGAAG CCGACTGGCA GTTTCAGCGA TGCGTTTGAA
ACGGCTTTTT TCAGTGTCAG CAATATTGGT CTGCACACCC GTGCTTACAA GGATAAGTTG
TTTGTGCATA CCGCGTCGTT GCGCAGCGGA AATCCGTATA AGCAGGTTGA CCTCCTCGTT
CTCGACGCCA AAGGTGAGAC CGTGTTGCAG GGCGCCACCG ATGATAATGG CAATGCGTTG
CTCAATTACA CCTTGAATGC TGGCCATGTG CTGGTATCGC GCAATGGCCG CGACATATCG
ATTCTTCCAT TTAATCAGCC GGCGTTGGAC CTGAGCGAGT TTGCGGTCGC TGGGCGTGAG
AACCCGTGGT TTGATGTGTT TGCTTGGTCC GGACGTGATT TGTACCGTCC GGGGGAAACG
CTGCGTATAT CGGCGTTGTT GCGTGATAGT GATGGCAAGC CAGTGAAGCC GCAGCCCGTG
TTTCTACGTT TGAAGCAACC GGATGGTAAA ACCTTCCGGG AGACCAGGTT GCAGCCTGCC
GAGCAGGGAT ATCTGGAGTT CACGCAGAAG ATTCCGTCCG ATGCTCCCAC CGGGCGTTGG
CGGGTTGAGT TCCGTACCGA TCCGGCCAGC AAGGAGGCGG TACAGGGGTT GGCTGTGCGG
GTTGAGGAAT TTCTTCCAGA ACGGATGAAG TTGGAGCTGT CCAGTGCGCA GCCGGTGCTG
CGGGCAAAGG CACCGTTCAC GTTGACGGCT GATGCGGCGT ATTTGTATGG CGCACCGGCG
GCAGGTAATC GTTTTACTGC AAATCTCGCC GTCGCGGTTG AACAGCATCC GTTGGACAAC
ATGCCCGGCT GGTTTTTCGG CGATGCCACG TTGCAACTGC CGCGTGGGGC GAAGGAGACC
ATTGATATCA CGCTTGGCGC GGATGGCCAT CTGGTCCATG ACATTGTGCT GCCTGAAGAG
GCCAAGCCGG TGAGTCCAAT GGCCGTGGTT GTTTCAGGGA GCGTCTACGA GAGTGGGGGG
CGCCCCGTTA CTCGGAGCCT CAAGCGGGTG CTGTGGCCGG CTGATGCATT GGTGGGGGTG
CGTCCACTTT TTGATGTTGC CTCGGGGGCT GATGCGAACG GCATGGCACG CTTTGAACTG
ACCCGGGTTG GTGTTGATGG TAAACCGCAA TCCGCTAAAG GGCTGAAGGC GACGTTGGTC
CGTGAGTTGC GTGACTATCA TTGGCGTTAC AGCGATGGCC GCTGGGATTA TGACTTTACG
CGGCGTTTCG AGAATAAGGA GACGCGGACG GTGGACATTT CCACGAGTCA CACCACCACG
TTGTCGTTGC CCGTGGAGTG GGGGGATTAT CGGTTGGAGG TATTCGATCC GGTGACCGGT
TTGACCATGC GTTATCTATT CCGTGCAGGC TGGAGTTGGG GAGACGATAA CCGCGGTTTG
GATGCGCGTC CGGACAAGGT CAAATTGGCC TTGGATAAAA CTAGTTACCG TGCTGGTGAT
ACTTTAAAGG TGACCATCAC TCCACCGCAC CCGGGCAAGG GGCTGTTGTT GGTGGAGAGT
GACAAGCCTT TGTATGTGCA AGCGATCGAC GCCAATCCGA GCACTACCCT TGAGATTCCG
GTGACTGCTG ATTGGGAGCG TCATGATGTT TACGTCACTG CATTAGTGTT CCGTGGCGGC
AGCGCTTCTA ACAACACCAC TCCGGCACGC GCGGTTGGGG AGGCTTATGT TCCGATGCAG
CGCAAGGAGC GGCGTGTAGC GGTTGGTCTT GTGGTGCCTA AGCAGATGCG TCCGGCACAA
TCGTTGCCGG TGACTGTCAG CGTACCGGAG TTGGCCGGAA AACAGGCGCA TGTGACGATT
TCTGCGGTGG ATGCAGGCAT CCTTAACATT ACCGGCTTCC CGGTGCCGGA TGCTGCGGCG
CATTTTTTTG CCCAACGCCG TTTGAGTGTG GATGCGTACG ATATTTATGG GCGGGTGATT
GAAAGTTTCG AGGGCGGTAC CGGCAGGCTG AAGTTTGGTG GTGATATGGC ATTGCCGCCA
TTGCCGCAGG CAAAGCGTCC GACGGCGCGG TCACAGACCG TTGACCTATT TTCCGGTGCG
GTCAAGCTGG ATGCGAAAGG GAATGCGCAT ATCCAACTGC CGGTTCCTGA CTTCAATGGT
GCTTTGCGTG TGTCGGCGTT GGTGTATAGC GACACTCGTT ATGGTCAGCG CGATGCTGAG
ACGGTGGTGC GTGCGCCCAT TCTGGCCGAA GCCAGCATGC CGCGCGTGAT GGCACCGGGT
GATCGCAGTA CGGTGACAGT GGATGTGCAG AACTTCACAG GTAAGCAGGG CAAATTTGCG
GTGAAGGTCG AGGGTGTCGG CCCGTTGGTG GTAGCTGAGG CTGGCCGCAG TGTCACGCTT
GGCATTGATG GCAAGACCAC GCTTAATTTT CCGTTGCGTG CGTTGGAGGG AAATAGCGTG
GCGCAAGTGC GGGTGCGGGT GGAGGGTAAT GGCTCCAAGG CGGAGCGCCA CTATGATTTG
CCGGTGCGTG CGGTTTGGCC ACAGGGATTA CGCACGCAGG CGCATGTGTT GAATGTCCTG
GCACCAATTG CGTTTGATCC GGCGTTGGCC AAGGGGCTGA TGCCTGATTC GGTCAATGCG
CGCTTGTCTG TCAGTGCATT GGCACCAATC CCGTTTGCCA GTGTGTTGCA GGGGGTGTTT
GAGTATCCGT ATGGCTGTGC TGAGCAGACG GCCAGTAAGG GCTATGCTGC GCTGTGGTTA
GACGATGCCA CTATCCGGTC GCTAGGCATT CAGGGGGTGA CTCCAGCACA GCGCCTGGAA
CGCTTGGAAG GTGCTTTGGG GCGGTTGGCG TCGTTGCAGA CGACGAATGG CCATTTCTCA
ATGTGTGGGG GGAACAGTGA TGTCAATCCG GTGTTGACAC CTTATATCGC TGGTTTCTTG
CTGGATGCTA AGGATGCTGG TTTTGCTGTG TCCGATACAG TGCTCCAGAA GGCGTTAAAC
CGGTTGAGTG AGGATCTGCT GTCTGGTGCT CATCTGTTTT ACGGTAATGA TCAAAGTGAG
GCACTGATGT TCGCCCACCA GGCGTGGTCG GGTTATGTGT TGGCACGTGT CAATCGCGCT
CCGTTGGGGA CGTTGCGTAC GCTGTATGAC AATGAGCGTG GTAAGGCAGT GAGCGGTCTG
TCGTTGGTGC ATTTGGGTGT TGCTCTGAGT TTGCAGGGTG ACCGCAAGCG TGGTGAAGCG
GCCATTGAAG CGGGCTTTGC CAAATCGGAG GGTGGTCGGC CGGAGGTGTT CGGTGATTAC
GGCAGCGTGA TTCGTGATAA TGCGTTGATG ATTGCCTTGG TGCGTGCCCA TGGTCTGGCG
AAGCCGGCCT ATGAGGCGCG TGTGATGGCC TTAGGACGTG ATCTGCAAGC GCGTCGCCGT
AGTGGCTGGT TGTGGTTGAG CACTCAGGAG CAGGTGGCGC TAGCGCAACT GGGCAGGGCG
TTGTTGGTCG ATCACAAGAA GCAGGTGTCC GGAACGTTGT ACGTGGGCAA GCAGCGCGAG
GATATTGCTG CAAGTAGGCT GATTGGTCGG AGTTTTGATG CGGCTGCTTT GGCGCGTGGG
GTGCGTTTTG TACCGCAAGG GGATGTACCG TTGTACGCCA GTTTTGAGGT TGCGGGTATC
CCGCGTCAAG CGCCGGTATC GGATGATAGC CAACTGTTAG TGGTGCGCCG TTGGTACACC
GTCGACGGCA AGCCGTGGAC ACCGGGGCCA TTGAAGGAGG GGCAGGCGTT GATCGTGCGG
GTGAGTGTCA CATCGAAGCA GAATATGCCG GATGCGTTGT TGACCGATCT GTTACCGGCG
GGGCTGGAGA TCGAGAATTT CAATCTTGGT GAGACCAGGC AATGGGCTGA TGTGACGGTG
GATGGGATCG CGCTCAGTGA GCGTGCCGAT GCTGCCGACA TCAAGCATGA GGAGTTCCGC
GATGATCGTT ATGTCGCAAT GTTGCAGTTG ACGGGCGGCA GGACGGCCAA TCTCTTCTAT
TTGGTTCGGG CGGTGACGCC AGGTAGTTAC AATGTGCCGC CCTCTCTGGT GGAGGATATG
TACCGACCGG CGTTGCGTGG TACAGGGCGG GTTGCTCCTG CAACGGTCAC GGTTGTGCAG
CCTTAG
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| Protein sequence | MRDRVAMMLR PLVCGWIPRA VLLLTVAFSF GCNRNHNGQL PQSSGEPVAV AKEPVKGFVL
VRAYPDQHDG ELALALEFSQ PLAATQEFDT LVRLEQGSGN HDGGWSLSDD AKTLRYPYVE
ADKHYTVLIS GDLLAATGSR LGKSRKEPVY TGELDPVVGF ASRGSILPAR GSRGVPVVSV
NVPEVDVEFM RVREKALPAF LARYHNAGQR SSWELSNQGN SRKRLSELAD PVYVTRFVLD
GKKNERALTY LPIQNIRELR EPGLYFAVMK PTGSFSDAFE TAFFSVSNIG LHTRAYKDKL
FVHTASLRSG NPYKQVDLLV LDAKGETVLQ GATDDNGNAL LNYTLNAGHV LVSRNGRDIS
ILPFNQPALD LSEFAVAGRE NPWFDVFAWS GRDLYRPGET LRISALLRDS DGKPVKPQPV
FLRLKQPDGK TFRETRLQPA EQGYLEFTQK IPSDAPTGRW RVEFRTDPAS KEAVQGLAVR
VEEFLPERMK LELSSAQPVL RAKAPFTLTA DAAYLYGAPA AGNRFTANLA VAVEQHPLDN
MPGWFFGDAT LQLPRGAKET IDITLGADGH LVHDIVLPEE AKPVSPMAVV VSGSVYESGG
RPVTRSLKRV LWPADALVGV RPLFDVASGA DANGMARFEL TRVGVDGKPQ SAKGLKATLV
RELRDYHWRY SDGRWDYDFT RRFENKETRT VDISTSHTTT LSLPVEWGDY RLEVFDPVTG
LTMRYLFRAG WSWGDDNRGL DARPDKVKLA LDKTSYRAGD TLKVTITPPH PGKGLLLVES
DKPLYVQAID ANPSTTLEIP VTADWERHDV YVTALVFRGG SASNNTTPAR AVGEAYVPMQ
RKERRVAVGL VVPKQMRPAQ SLPVTVSVPE LAGKQAHVTI SAVDAGILNI TGFPVPDAAA
HFFAQRRLSV DAYDIYGRVI ESFEGGTGRL KFGGDMALPP LPQAKRPTAR SQTVDLFSGA
VKLDAKGNAH IQLPVPDFNG ALRVSALVYS DTRYGQRDAE TVVRAPILAE ASMPRVMAPG
DRSTVTVDVQ NFTGKQGKFA VKVEGVGPLV VAEAGRSVTL GIDGKTTLNF PLRALEGNSV
AQVRVRVEGN GSKAERHYDL PVRAVWPQGL RTQAHVLNVL APIAFDPALA KGLMPDSVNA
RLSVSALAPI PFASVLQGVF EYPYGCAEQT ASKGYAALWL DDATIRSLGI QGVTPAQRLE
RLEGALGRLA SLQTTNGHFS MCGGNSDVNP VLTPYIAGFL LDAKDAGFAV SDTVLQKALN
RLSEDLLSGA HLFYGNDQSE ALMFAHQAWS GYVLARVNRA PLGTLRTLYD NERGKAVSGL
SLVHLGVALS LQGDRKRGEA AIEAGFAKSE GGRPEVFGDY GSVIRDNALM IALVRAHGLA
KPAYEARVMA LGRDLQARRR SGWLWLSTQE QVALAQLGRA LLVDHKKQVS GTLYVGKQRE
DIAASRLIGR SFDAAALARG VRFVPQGDVP LYASFEVAGI PRQAPVSDDS QLLVVRRWYT
VDGKPWTPGP LKEGQALIVR VSVTSKQNMP DALLTDLLPA GLEIENFNLG ETRQWADVTV
DGIALSERAD AADIKHEEFR DDRYVAMLQL TGGRTANLFY LVRAVTPGSY NVPPSLVEDM
YRPALRGTGR VAPATVTVVQ P
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