Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0561 |
Symbol | |
ID | 6120324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 611399 |
End bp | 615085 |
Gene Length | 3687 bp |
Protein Length | 1228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648630 |
Product | PilY1 gene product |
Protein accession | YP_001775196 |
Protein GI | 170729763 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.762386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAC AAGATTTGAT GGTAGGTATG AGCAGGATTA TTCTCAATAA CCTCTTCTTT TTTAGATGTG TGGTTGCGGT GTTCTCGGCA CACTCGTTGG TCATCAGTGG TGCTGTACAT GCGGGGGTGC AGATCTCTCA GTCCCCATTA CATGGTGGCG GCGACGTGCC AGGCAACCTG GCTATTGTTG CGTCTATCGA GTTTCCCACG GTGATCAGCG TGGCTAATCT GGCCGACACC TACACCCCAG GGGGGAGGTA TGTCGGCTAC TTCGATTCCA ACAAGTGCTA CAAATACCAC TACAGTCCTC AGGAAAGTGA TCGTTACTTC TATCCCGTTG CTTCTCCAAG GCCTCAAGCC AATTACGGTT GTAATACCAC AGGCGGGGTG TGGGCTGGGA ATTTTCTGAA TTGGGCTGCC ACCCAGACGA TTGATCCATT TCGCTCCGCA TTGACTGGTG GCTATCGTGT GCGAGATACC GTCAGCGAGA TCATCTTGGA AAAAGCAGTG ATGGATCGTG CTTATCCTGG AAATTTCCCG CGTCGCACCA TCCAAGGCCT GGCTCTTACC ACTTCAGTGC CGGCACAGTG GCTCCGTTTC CGTATGCGCA TTGACGGGCT CGGCAACAGA ATGCGGTTTA CTCAGTTTAC TGGCTTATCA ATGGACCCTT TAGAAATGGA GGGTCAACCT TACGATCCTT CCAGGCATCC ATTAAACAGC AATGATAGAG GCGTTTACGA AGTGAGCGTC AGAGTCAAAG TGTGCGATGC CTCGGTCGGC TTGGAGTCCA ACTGCGTGGC CTATCCCAGC GGTTTCTACA AGCCCGAGGG GCTGATCCAG GAATATTCCA AGCGTGTCCG CTATAGCGTT TTTAGTTACA AAAATGACGA CTATTACTTG GACGATGGCG GTGTTTTGCG TGCCCGCCAG AAGTTTGTTG GGCCTAAAAC CTACTATCCG GAGCAAGGCG AAAAAACCAA CCCCCATGCC GAATGGGATC CTCAAACTGG CGTCCTCTAT GACAATCCCA ATCCTGAGGA TGCTAAGGCG ACTACTCATC GGGTGGGTCG TACTATCGGC AATTCCGGGG TGATTAACTA TTTGAACAAG TTCTCTCAGA TGGAGACCGG TAAGAACACG AAGGGGTTCG ATCCTGTCAG TGAGCTTTAC TACACGGCAT ACCGTTATTT TAAACGCCTG GGCAATGTCC CGGAATATTC GGTATTGACG GGTTCTGTGA ATGAAAAGTA CCAGCAGGCC GATGCGTTTC CGGTGATTAC CGATTGGGAT GACCCGATTC GTTATGCCTG CCAGAGCAAT GTTGTTCTGG GAATCGGCGA TACCCACACC AATTTCGATA AGAATCTACC TGGGAATACC AACACAACCG GAGAGCCTGT CAAACCCCAA GCGGTCAGAA ATGACAGAAG CATTGACGTG GTCAAGCGCA TGGTGCAGAT CTTCCAGATG GAAGGCATGA GACAGCAGGA TGCCATGACG TCGGCTGTGG CACCTTCATT CAACTTTCTA GTGCCTGGCG CCGGAAACAA CTCAGCCTAC ATTGCCGCTC TGGCCTACGA TGCCCGTACC AAGGACATGC GTCCTGATCT TGAAGGGGAT CAGCTGCTCA CAACACATTG GGTGGATGTG GTGGAGGGGG GAGATTACAA AATTCCAATA TCAACCAACC AATACTGGTT GGCCGCGAAA TATGGCGGAT TTCAAGTGCC TGCCGGTTAC GATCCGGATA AGACAGTTAA CCCCCTGTCT GAGGCGACTT GGTGGACCAA CGGCGAGTAC GTCAATGGCG ATCCTAATGC CAAGCGGGCG GACAATTTCT ACGTTGCCGC CGACGCGGAA AAGATGGTAG CCAGCCTCAA ACAGGCCTTC TCGCGCATCG TTGCCGAGAT CAAGGGGGCA GGGACGGGAC TGTCTAGCAA CAGCGCTAGA CTTGAAACCG GTGCGGTTAC CTACCAGGCA CAATTTTTCA GTGGCACCTG GCGTGGTGAT CTGATCGCCT ATCACGTAGA TAAAGTGACC GGCGCGCTCA CCCCATTTTG GAACGCCAAC TTCCCGGCAT GGGAACAGCG TGTTATCAAG TTTGCCAATG CCACCACACT GCAAGACTTC ACCAAAAAAA ATCTAGGCCA AACCGCGCTG GCATCGGCGA GTGCGCAGCA GATTAATTAC CTGCGTGGTG ATCGCAGCCA GGAAGGCAAT GTGCCCGGCA AACTCCGCAT CCGCAGCGGC ATCATGGGAG ATATTGTCAA CTCCCAACCG CTCTATGTTG GTGCCCCCAA TGGACGGCTG TACACAACCG CGAACTTCAC TGGGGCGAGC GCCTATGCCG CGTTCGCCGC CCAGCAGGCC AACCGGGTGC CGGTGGTTTA CGTGGGTGCC AATGACGGCA TGTTGCATGC CTTCGATGCC AATACCGGTA AAGAAATATT TGCATTTGTG CCTCGTGCGG CCATGCCCAA ATTGCTGGAG TACACCGATC AGAACTACGT ACACCAGTAC TACGTGGATG GTGAACTGAC CGCCGCTGAT ATTTACGATA CCAAGTTGGG GTGGCGCTCG GTGCTGGTGG GGACGTTGGG TCGAGGCGGC AAAGGTCTGT TTGCCTTGGA TGTGACCGAC CCTTCCAATA TTCGTTTGCT GTGGGACAAA ACGTCCGCGG ATATTGGCGG CTTGGGGAAT ACCTTGAGCA AACCGATGAT TGTGCAGACC TCCGATGGCA CCTGGTCGGT ATTGCTTGGC AATGGTCCAA ACAGCACTGC GGATAACGCG CAACTGATCG TGATGAATCT GTTGACCGGT CATGCAGCCC AAGTGCCCGT TAGCAAGACC TCAAACAATG GACTGTCTGG TGTATTTCCC TGGTCCAGCC AGAGCAACGG CATTACGGAT CGCGTGTATG CAGGTGACCT GCTGGGCACG TTGTGGCGCT TTACTTTTAG CGATAACGCT TGGAAGGTGG TGCCGCTGTT TACTGCCACG TATCAAGGGA AGGCACAGCC GATCAGCGCA ACTCCGCTGG GGGCCATTGA GCGCTCCACG GGGCGGATGT GGATTTTCTT TGGGACAGGG AGAGTGTTGT CTTCGCATGA TATGGATAAC AAGGAGGTAC AGAGCTGGTA TGGCCTGATT GACCAGGGAA CGACGATTTC TGGGCGTACT GGGCTGAGCC AGGTACAGAT TGTTGATGAG GGTGTAGTCA ATGGGTATGC CGTGCGTACG GTTTCTGATC CTAAGAATAT AGGTACTGAT GGCTGGTATA TGGATCTGAT TTCGCCGAAA TCCGGTAAGC AGGGAGAACG GATGATTGTG TCCAACATGT TCCGTGGAGC GGCGTTGATC GGGACCACTC GTATTCCGGA TAACAGCGAC ATTTGCAAGC TCAGCGGCAG TGGGTTTGTC ATGGCGATCA ACCCATTCAC TGGTGGCCGG TTGGGTCAAT GGTTTTTTGA TCTCAACACT GGTGGTGGCA GTGGTGGTAG TGGTGGTGCG TTGAATGGTA ATCCAGTGTC TGGTGTGGGT GTGAGCAGTG CGCCGAATAG CCCTGTATTT ACCGGCAATA TCATGCAAAT AGGAGCGGAT GACGGTACGG TTACGTCGTT GAAGACGCCC TCCAGCGGAG GCCTCAATAT AAACCGTGTG TCATGGCGTG AAATCTTGAG GCCGTAA
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Protein sequence | MKEQDLMVGM SRIILNNLFF FRCVVAVFSA HSLVISGAVH AGVQISQSPL HGGGDVPGNL AIVASIEFPT VISVANLADT YTPGGRYVGY FDSNKCYKYH YSPQESDRYF YPVASPRPQA NYGCNTTGGV WAGNFLNWAA TQTIDPFRSA LTGGYRVRDT VSEIILEKAV MDRAYPGNFP RRTIQGLALT TSVPAQWLRF RMRIDGLGNR MRFTQFTGLS MDPLEMEGQP YDPSRHPLNS NDRGVYEVSV RVKVCDASVG LESNCVAYPS GFYKPEGLIQ EYSKRVRYSV FSYKNDDYYL DDGGVLRARQ KFVGPKTYYP EQGEKTNPHA EWDPQTGVLY DNPNPEDAKA TTHRVGRTIG NSGVINYLNK FSQMETGKNT KGFDPVSELY YTAYRYFKRL GNVPEYSVLT GSVNEKYQQA DAFPVITDWD DPIRYACQSN VVLGIGDTHT NFDKNLPGNT NTTGEPVKPQ AVRNDRSIDV VKRMVQIFQM EGMRQQDAMT SAVAPSFNFL VPGAGNNSAY IAALAYDART KDMRPDLEGD QLLTTHWVDV VEGGDYKIPI STNQYWLAAK YGGFQVPAGY DPDKTVNPLS EATWWTNGEY VNGDPNAKRA DNFYVAADAE KMVASLKQAF SRIVAEIKGA GTGLSSNSAR LETGAVTYQA QFFSGTWRGD LIAYHVDKVT GALTPFWNAN FPAWEQRVIK FANATTLQDF TKKNLGQTAL ASASAQQINY LRGDRSQEGN VPGKLRIRSG IMGDIVNSQP LYVGAPNGRL YTTANFTGAS AYAAFAAQQA NRVPVVYVGA NDGMLHAFDA NTGKEIFAFV PRAAMPKLLE YTDQNYVHQY YVDGELTAAD IYDTKLGWRS VLVGTLGRGG KGLFALDVTD PSNIRLLWDK TSADIGGLGN TLSKPMIVQT SDGTWSVLLG NGPNSTADNA QLIVMNLLTG HAAQVPVSKT SNNGLSGVFP WSSQSNGITD RVYAGDLLGT LWRFTFSDNA WKVVPLFTAT YQGKAQPISA TPLGAIERST GRMWIFFGTG RVLSSHDMDN KEVQSWYGLI DQGTTISGRT GLSQVQIVDE GVVNGYAVRT VSDPKNIGTD GWYMDLISPK SGKQGERMIV SNMFRGAALI GTTRIPDNSD ICKLSGSGFV MAINPFTGGR LGQWFFDLNT GGGSGGSGGA LNGNPVSGVG VSSAPNSPVF TGNIMQIGAD DGTVTSLKTP SSGGLNINRV SWREILRP
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