Gene Xfasm12_0453 details

Gene Information

• Locus tag: Xfasm12_0453
• Symbol: greA
• ID: 6119516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 500384
• End bp: 500860
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641648523
• Product: transcription elongation factor GreA
• Protein accession: YP_001775094
• Protein GI: 170729661
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACCGC CCATGACTTT GAAAGGTGTG CGTCGTCTTC GTGATGAGCT GGAACATCTG 
AAATTGGTCA AGCGTCCAGA GATTATCAAT GCGATTGCAG AGGCACGTGC GCATGGGGAT 
CTTAAGGAAA ATGCTGAATA TCACGCTGCG CGTGAACAAC AAAGCTTTAT TGAAGGTCGC 
ATTAAACAGT TGGAAGGCGA GCTTTCGCAT GCTGAAGTGA TTGATGTCGC CAAACTCAAT 
GCGGGTACCA AGATCGTGTT TGGTGCCACG GTGACGTTAG CCGATCTGGG GACTGATGAA 
GAGAGTCGCT ATCAGATCGT GGGCGATCTT GAGGCTGACA TCAAACAGGG TTTGGTTGCG 
ATTTCCTCGC CGGTGGCGCG TGCGCTGATT GGCAAACAAG AGGGCGATAC GATCGTGATT 
GAGGCGCCTG CTGGCCGACG TGAGTACGAG GTGGTTGCGG TGGAATACAT CAGCTGA 

 

Protein sequence

MRPPMTLKGV RRLRDELEHL KLVKRPEIIN AIAEARAHGD LKENAEYHAA REQQSFIEGR 
IKQLEGELSH AEVIDVAKLN AGTKIVFGAT VTLADLGTDE ESRYQIVGDL EADIKQGLVA 
ISSPVARALI GKQEGDTIVI EAPAGRREYE VVAVEYIS