Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0272 |
Symbol | |
ID | 6120575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 316158 |
End bp | 317465 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641648351 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001774925 |
Protein GI | 170729492 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCAGA TTCGCCAGGC GCCTGCGGCT TCTGCCAGCA ATGCTACTGA ATCCAAGCAG GAGATTCGTA ATTACACGAT GAACTTCGGT CCACAGCATC CTGCCGCGCA TGGGGTGTTG CGTCTGATTC TTGAAATGGA CGGGGAGACA GTGGTTCGTG CGGATCCGCA TATCGGTCTG CTGCATCGCG GGACTGAGAA ACTTGCTGAG TCCAAGCCGT TTAATCAATC CATCGGTTAC ATGGATCGCT TGGACTATGT GTCGATGATG TGCAATGAGC ACGCTTACGT ACGCGCCATT GAGACTTTGA TTGGCATCCA AGCGCCGGAG CGGGCGCAGT ACATTCGTAC GATGTTCGAT GAGATCACGC GTATTCTGAA TCATTTGATG TGGCTGGGTT CCAATGCGTT GGACCTTGGC GCAATGGCTG TGATGTTGTA TGCGTTTCGC GAGCGTGAGG AGCTGATGGA TGTGTATGAG GCGATCAGCG GCGCACGCAT GCACGCAGCC TACTATCGTC CAGGTGGTGT GTATCGTGAT CTGCCGGATA CGATGCCCAA GTACAAGCAA TCACGTTGGC ACAAGGGCAA GGCGCTGAAG CGTCTGAACG CTGCTCGCGA AGGTTCAATG CTCGATTTTC TGGAGCACTT CACTGACACG TTCCCGCAGC GTATCGACGA GTATGAGACG TTACTTACTG ACAACCGTAT CTGGAAGCAA CGCACCGTTG GTGTGGGTGT GATTGAGCCG GATGTGGCCA AGGCCTGGGG AATGACAGGT GTCATGTTGC GTGGCTCGGG TATTGCTTGG GATCTGCGTA AGAAGCAGCC TTACGCTAAA TATGATGCGG TCGATTTTGA TATTCCGCTT GGCACGTGTG GTGATTGCTA TGACCGTTAT TTGTGCCGTG TGGCTGAGAT GCGTGAGTCG AATCGCATCA TCAAACAGTG TGTGCAGTGG TTGAAGGTGA ATCCCGGTCA GGTGATGGTT GAAAACTTCA AAGTTGCTCC GCCCAAGCGT GAGAGCATGA AGGACGACAT GGAGGCATTA ATTCACCACT TTAAATTGTT CAGTGAAGGC TATTGTGTTC CTGCCGGTGA AACTTACAGT GCGGTCGAGG CGCCGAAAGG TGAGTTTGGT TGTTACTTGA TCTCCGATGG TGCGAATAAG CCGTTTCGTG TGCATTTGCG TGCTCCAGGG TTTGCGCACT TGTCCTCAAT GGATGCCGTG GTGCGTGGCT ATATGTTGGC CGATGTGGTG GCCATGATTG GTACATATGA TTTAGTGTTT GGTGAGGTCG ACCGATGA
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Protein sequence | MNQIRQAPAA SASNATESKQ EIRNYTMNFG PQHPAAHGVL RLILEMDGET VVRADPHIGL LHRGTEKLAE SKPFNQSIGY MDRLDYVSMM CNEHAYVRAI ETLIGIQAPE RAQYIRTMFD EITRILNHLM WLGSNALDLG AMAVMLYAFR EREELMDVYE AISGARMHAA YYRPGGVYRD LPDTMPKYKQ SRWHKGKALK RLNAAREGSM LDFLEHFTDT FPQRIDEYET LLTDNRIWKQ RTVGVGVIEP DVAKAWGMTG VMLRGSGIAW DLRKKQPYAK YDAVDFDIPL GTCGDCYDRY LCRVAEMRES NRIIKQCVQW LKVNPGQVMV ENFKVAPPKR ESMKDDMEAL IHHFKLFSEG YCVPAGETYS AVEAPKGEFG CYLISDGANK PFRVHLRAPG FAHLSSMDAV VRGYMLADVV AMIGTYDLVF GEVDR
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