| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0207 |
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| Symbol | |
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| ID | 6119709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 247884 |
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| End bp | 249986 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641648294 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001774870 |
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| Protein GI | 170729437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA TCACCAAAAC CTTCCAGTAT GGCAAGCATA CCGTGACCCT GGAAACCGGC
GAAGTCGCCC GTCAGGCGAG TGGAGCTGTT ATCGTCAAGA TGGATGACAC TGTGCTTCTG
GTCACTGTTG TTGCTGCAAA AACTGCGCGA GAGGGGCAGG ATTTTTTCCC ATTGACGGTT
GATTATCAGG AGAAGTTCTA TGCCGGTGGG CGGATCCCGG GTAGCTTCTT TAAGCGTGAA
GGCCGTGCGA CCGAAAAAGA AACGTTGATT TCTCGATTGA TTGACCGTCC GATCCGTCCG
TTGTTTCCTG AAGATTACAA GAACGAAGTT CAGATTATCG CTATGGTTAT GTCACTCGAT
CCGGAAATCG ACGGTGATAT TCCCGCAATG ATTGGTGCTT CAGCTGCATT ATCACTGGCT
GGTATTCCGT TTAAGGGACC GATTGGTGCT GCTAAGGTTG GTTACAATGA TGGTCAATAT
ATCCTCAATC CCACTGTCAG TGAACTGAAA AAATCTCAGT TGGAGCTTGT TGTCGCTGGT
ACTGCCAATG CCGTGCTGAT GGTTGAGTCT GAGGCTGCAT TGCTTTCCGA AGAAGTAATG
TTAGGGGCGG TCATTTTCGG TCATCGCGAA ATGCAAAAAG TGATTCAGGT GATTGATTCA
CTGACCGCAG AAGCTGGTAC GGAGCCGTCT GATTGGGTGC CCCCGGCCAA GAATGATGCT
TTGGTCATTG CGTTGAAGGA AGTAATTGGT GGTCGCTTGT CCGACGCTTT CCATATCAGA
GAGAAGTTGC AGCGTCGCGA CGCGATCGCT GCTGTTAAAG ATGATGTGAT TCAGCAGTTG
GCTGGCCGTC TTGAAGTTGA GGGCTGGAAC TTGGCGGAAT TGTTAAAGGA ATTCGGTGAA
CTGGAATACC GTACTATGCG TGATGCACTG TTGGACACTA AAGTCCGCAT TGATGGACGC
TCTCTGGAAG CTGTACGCCC GATCACCGTA AAGGTTGGGG TTCTGCCGCG TGTTCATGGT
TCCGGGTTAT TTACACGTGG AGAGACTCAA GCGATTGTAG TCACTACTTT GGGTACAGCG
CGCGATGGCC AAGTAATTGA TGCAGTCACT GGTGAATATA AGGAAAATTT TTTATTCCAT
TACAACTTCC CGCCATATTC AGTGGGCGAA TGTGGCCGTT TTGGAGTACA GAAGCGCCGT
GAGATCGGTC ACGGCCGTCT TGCTAGGCGC GGGGTGTTGG CTGTGATGCC GAGTTTGGAT
GAATTCCCAT ACACGATCCG TGTTGTCTCT GAGATCACCG AATCGAACGG TTCCTCATCT
ATGGCTTCGG TGTGCGGTTC CTCGCTGGCG CTCATGGATG CTGGTGTGCC GGTGAAAGCA
CCAGTGGCTG GCATTGCGAT GGGCTTAGTC AAGGAAGGGG AGCGCTTTGT TGTGTTGAGC
GACATTCTCG GTGACGAAGA TCACCTTGGC GATATGGATT TCAAGGTTGC TGGTACCTCC
GAAGGAGTGT CCGCGTTACA GATGGACATT AAGATCGAAG GCATAACAGA AGAGATTATG
AGGCAGGCTC TACAGCAGGC TAAAGTTGGA CGTCTGCATA TCCTTGGCGA GATGGACAAG
GCACTGGCTG CACCGCGTGC CGAGTTGTCC GACTACGCTC CTCGCCTGCT GACGATTAAG
ATTCATCCTG ACAAAATCCG CGATGTCATT GGTAAAGGTG GTTCGACCAT CCAGGCGATC
ACTAAGGATA CTGGGACACA GATCGATATT CAGGACGATG GTACGATCGT TATCGCTTCA
GTCAACAATG CTGCAGCCCG GGAGGCTAAG CGTCGTATCG AGCAAATTAC CTCGGATGTT
GAGCCGGGTC GGATTTATGA GGGCAAGGTT GCTAAGATTA TGGATTTTGG CGCTTTCGTG
ACTATTTTGC CTGGAAAAGA TGGTTTAGTG CACGTTTCCC AGATATCCAG CGAGCGTGTG
GAGCGTGTTG GCGACAAGCT GAAGGAAGGC GATGTGGTTC GTGTGAAGGT CTTAGAAGTT
GATAAGCAAG GTCGAATCCG TCTTTCGATC AAAGCAGTGG AGGAAGAGGT TGCCAGCATA
TGA
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| Protein sequence | MAKITKTFQY GKHTVTLETG EVARQASGAV IVKMDDTVLL VTVVAAKTAR EGQDFFPLTV
DYQEKFYAGG RIPGSFFKRE GRATEKETLI SRLIDRPIRP LFPEDYKNEV QIIAMVMSLD
PEIDGDIPAM IGASAALSLA GIPFKGPIGA AKVGYNDGQY ILNPTVSELK KSQLELVVAG
TANAVLMVES EAALLSEEVM LGAVIFGHRE MQKVIQVIDS LTAEAGTEPS DWVPPAKNDA
LVIALKEVIG GRLSDAFHIR EKLQRRDAIA AVKDDVIQQL AGRLEVEGWN LAELLKEFGE
LEYRTMRDAL LDTKVRIDGR SLEAVRPITV KVGVLPRVHG SGLFTRGETQ AIVVTTLGTA
RDGQVIDAVT GEYKENFLFH YNFPPYSVGE CGRFGVQKRR EIGHGRLARR GVLAVMPSLD
EFPYTIRVVS EITESNGSSS MASVCGSSLA LMDAGVPVKA PVAGIAMGLV KEGERFVVLS
DILGDEDHLG DMDFKVAGTS EGVSALQMDI KIEGITEEIM RQALQQAKVG RLHILGEMDK
ALAAPRAELS DYAPRLLTIK IHPDKIRDVI GKGGSTIQAI TKDTGTQIDI QDDGTIVIAS
VNNAAAREAK RRIEQITSDV EPGRIYEGKV AKIMDFGAFV TILPGKDGLV HVSQISSERV
ERVGDKLKEG DVVRVKVLEV DKQGRIRLSI KAVEEEVASI
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