Gene Xfasm12_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0195 
Symbol 
ID6121186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp233717 
End bp234982 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content53% 
IMG OID641648281 
Productpolynucleotide adenyltransferase 
Protein accessionYP_001774858 
Protein GI170729425 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGCA TCGTACCGCG TGGACACCAT ACGATTTCAC GTAAGGACAT TAGTCCGAAT 
GCGTTGCGGG TGTTGTACCG CCTGCGTGAG GCAGGTTTCG GTGCGTATTT GGTTGGCGGT
GCGGTTCGTG ATTTGTTGGT AGGCGGTCAT CCCAAAGATT TCGACTTGGC TACCGATGCA
ACACCTGAGC AGATCAAGCA GTTGTTCCGG AGTTGTCGTT TAATCGGTCG CCGCTTTCGT
TTGGCGCATG TGGTTTTCGG GCGCGAGATT ATTGAGGTCG CTACCTTCCG TGCCAATAGT
GATGATGGAA GTGGTGATCG TGAGCTGGAG AATGGCCGTT TAGTGTGTGA CAACGTCTAC
GGTACGATTG AGGACGATGC GACCCGTCGC GATTTCACCT GTAACGCGCT TTACTACACT
ATCGAAGATT TTTCAGTACG TGACTACGTC GGTGGTTTTG AGGATGTCCA GTCTCGGCTG
ATGAGATTGA TTGGCGATCC AGTGCGACGT TATCAGGAAG ATCCAGTGCG CATGCTGCGT
GCGGTGCGTT TAGCAGCGAA GCTCGGTTTC GAGATTGAGG CTGGTACCGC CGAACCAATT
TCGCGTATGG CTGGATTGTT GGCTGACGTG GCGCCAGCCC GTTTGTTTGA GGAAGTGCTC
AAGCTATTTC TCTCAGGACA TGCTGTGGTC AGTTTCGAGG CCTTAGAGGA TTTTGGTCTG
ATTGATGTGT TGTTTCCCGA GAGCGCTAAG GCATTGCGTG CTAACCGTAG TGGTGCATTG
CGGCGGGTAT TGATCGAAGG GCTGCACAGT ACTGATAAGC GGGTGATTAA AGATGAACCA
GTGTCGCCGG CATTCTTGTT CGCATTGTTG TTATGGCCTG GTTTTTGCCA TGCGTTGGTC
ACGTTGCAAT TGCAGGGTGT GCAGCCAGAG GAGGCACAAC GTCGTGCAGC GGATCGGGTG
ACGTTGCATC ATCTTGAGCG TGTCGCTTTG CCGCGCCGCT TTTCTTTGCC GATGCAAGAG
ATTTGGTTGT TGCAAAACCG TTTTATTTCA CGCCAACCTA AGCGTGTCTT ACGGCTTCTG
GAACATCCGC GCTTTCGTGC TGCCTTCGAT TTCCTGGTAG TGCGTTTGGC GGCTTCTGCT
GAGCATGCTG CAGACGTGGA GTTTTGGCGT GTGGCACAAC AGCAGCCTTC TGAAGACTCT
CTGGCGTCAG CCATTGATGC TGTGCGGTTT GAATCGGAGG AAGTGGGTGT GTCGCGTCAG
CGGTAA
 
Protein sequence
MLCIVPRGHH TISRKDISPN ALRVLYRLRE AGFGAYLVGG AVRDLLVGGH PKDFDLATDA 
TPEQIKQLFR SCRLIGRRFR LAHVVFGREI IEVATFRANS DDGSGDRELE NGRLVCDNVY
GTIEDDATRR DFTCNALYYT IEDFSVRDYV GGFEDVQSRL MRLIGDPVRR YQEDPVRMLR
AVRLAAKLGF EIEAGTAEPI SRMAGLLADV APARLFEEVL KLFLSGHAVV SFEALEDFGL
IDVLFPESAK ALRANRSGAL RRVLIEGLHS TDKRVIKDEP VSPAFLFALL LWPGFCHALV
TLQLQGVQPE EAQRRAADRV TLHHLERVAL PRRFSLPMQE IWLLQNRFIS RQPKRVLRLL
EHPRFRAAFD FLVVRLAASA EHAADVEFWR VAQQQPSEDS LASAIDAVRF ESEEVGVSRQ
R