Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0163 |
Symbol | |
ID | 6121153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 199427 |
End bp | 200767 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641648251 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_001774830 |
Protein GI | 170729397 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTCG AAACTTTGGG ATTGTTGCCT TCCTTACTTC GTGCTCTTAG CGAGCAAGGT TACGAAATCC CGACCCCAAT TCAGCAGCAG GCGATTCCAT TGGCATTAGC TGGCCACGAT TTGCTTGCTG CCGCGCAAAC AGGGACAGGT AAGACGGCTG CGTTCGGCTT GCCTGTATTG CAACGATTGA TGGCCGCTTC ATCTAATGTT GGTGCCGGTA AGCCGCGTGC TTTGGTGCTG ACACCGACCC GTGAGCTTGC GACTCAGGTC CACGACAGCC TACGTGGTTA CGCCAAGTAT CAACGTGTAT CAAGTGCGGT GATTTATGGT GGTGTGGGGA TGGGGAATCA GTTGGATGTG CTGCGCCGTG GCGTAGATTT GTTGATTGCC TGCCCGGGTC GTTTGATTGA TCATATTGAA CGTCGCAGTG TGGATTTGTC AGGCGTCGGG ATTTTGGTAT TAGATGAGGC TGATCGCATG CTTGACATGG GTTTCCTCCA CTCAATTAAA CGTATCCTTG GCAAACTACC GCGGCAGAAT CGCCAAACTC TGCTGTTCTC TGCGACATTT GCTGAGCCGA TTAAACAGTT GGCGTTAGAG TTTATGTGCC GCCCACGCGA GGTGATGGTG GCGTCGCATA ACACCGTTGC TGAGACCATT ACGCATCGTG TGCATCCGGT CGATGTTAGC CGCAAGCGTG AATTGTTGTT GTATCTGTTG GCTCAAGATA GCAGGGAGCA GACACTGGTG TTCGTGCGGA CCAAGCATGG CAGTGACAAG CTTGCTACGT TCTTGGAGAA ATATGGAATC AAGACAGCGG CGATTCACGG TAATAAGACT CAGGGCCAGC GTCTGCGTGC ATTAAACAGT TTCAAAGCAG GGCGAGTTAC CGTGCTGGTG GCCACTGACA TTGCTGCGCG CGGAATTGAT ATTGACCAAT TGCCAAAGGT GATCAATTAC GATTTGCCTA TGGTGGCTGA GGATTATGTG CATCGCATCG GGCGTACTGG ACGCAATGGT GTGCAGGGAG AGGCAATTTC ATTAGTCACT CAGGAGGACG CTAAGTTATT GCGTCAGATC GTGCGTTTGC TTGATCGTGA CATGGATATT CGCGATGTAC CGGATTTCGA ACCTCAAGTC CCGATCCGTT GGGGTAACAG TGCTCCGGGA AAGAGTAAGC AGCCTGCTGG ACAGCACCCA CCACGTAAGA GTCAACATCG GCGAGCATTC GGCAAAGCAT CTGTGCATAC GACGCCTGCT TTAACAAAAC AATCAGGTGT ACAACATAGC AATGGGTCCC GTAATCGTGA TGGAATGCTC CCGGTTCATC AGCGTGGTTG A
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Protein sequence | MNFETLGLLP SLLRALSEQG YEIPTPIQQQ AIPLALAGHD LLAAAQTGTG KTAAFGLPVL QRLMAASSNV GAGKPRALVL TPTRELATQV HDSLRGYAKY QRVSSAVIYG GVGMGNQLDV LRRGVDLLIA CPGRLIDHIE RRSVDLSGVG ILVLDEADRM LDMGFLHSIK RILGKLPRQN RQTLLFSATF AEPIKQLALE FMCRPREVMV ASHNTVAETI THRVHPVDVS RKRELLLYLL AQDSREQTLV FVRTKHGSDK LATFLEKYGI KTAAIHGNKT QGQRLRALNS FKAGRVTVLV ATDIAARGID IDQLPKVINY DLPMVAEDYV HRIGRTGRNG VQGEAISLVT QEDAKLLRQI VRLLDRDMDI RDVPDFEPQV PIRWGNSAPG KSKQPAGQHP PRKSQHRRAF GKASVHTTPA LTKQSGVQHS NGSRNRDGML PVHQRG
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