| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0150 |
|---|
| Symbol | |
|---|
| ID | 6121140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 184960 |
|---|
| End bp | 185742 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641648238 |
|---|
| Product | putative deoxyribonuclease |
|---|
| Protein accession | YP_001774817 |
|---|
| Protein GI | 170729384 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTG TATTAATTGA CAGCCACTGC CATCTTGATG CCGACGCATT TGATGGCGAC
CGTGCCGAGA TAATCGCACG CGCCCAAGCT ACCGGAGTCA TTGCGCAAGT GATACCCGCA
GTCACTGCAG CCAAATGGCC AAAGCTACGC ACCATTTGCA CGCAAACATC AGGACTCTAT
CCAGCTTACG GACTGCACCC GATGTTTCTA TCAGAACATC ACCCAACGCA CCTACATGTA
TTGCGAGAGT GGTTAGAACG CGAACGCCCC TGCGCAATTG GCGAATGCGG CCTGGACTTC
TATGTGGAAG GGCTGAACAG AGAGATACAG CACACTTACT TCATCAGTCA ATTGATGCTT
GCGCGAGAGT ACGCATTGCC GGTGATCGTG CATGCTCGGC ATGCAGTCGA ACAGGTCATT
GCAATGATCA AGACAGTAGG AACGCTGCGT GGTGTCGTAC ATAGCTTCTC CGGTAGCCTA
GAGCAGGCAC GGCAACTGTG GAAACTAGGC TTCATGATCA GTTTTGGGGG GGCGCTAACC
TATCCACGCG CTCACCGTTT GCATCGTTTG GCGATGGAGA CACCATTAGA CTGTTTGTTG
CTGGAGACAG ACGCGCCTTA CCAACCAGAT AGCGAAATCC GTGGGAAACG CAACGAACCA
GGACGTCTGC TAACGATCTT GGAGTACATC GCAACGCTAC GCAAACAAGA TCGTACTGAA
ATATCCAAAG TGACTCGCGC GAATACGGAG CAGTTGTTTG GATTAAAAGT CACACCCACC
TGA
|
|---|
| Protein sequence | MNVVLIDSHC HLDADAFDGD RAEIIARAQA TGVIAQVIPA VTAAKWPKLR TICTQTSGLY
PAYGLHPMFL SEHHPTHLHV LREWLERERP CAIGECGLDF YVEGLNREIQ HTYFISQLML
AREYALPVIV HARHAVEQVI AMIKTVGTLR GVVHSFSGSL EQARQLWKLG FMISFGGALT
YPRAHRLHRL AMETPLDCLL LETDAPYQPD SEIRGKRNEP GRLLTILEYI ATLRKQDRTE
ISKVTRANTE QLFGLKVTPT
|
|---|
| |