Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0145 |
Symbol | |
ID | 6121135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 177502 |
End bp | 179415 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641648233 |
Product | hypothetical protein |
Protein accession | YP_001774812 |
Protein GI | 170729379 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.549685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTT TCCTCATTCG TTTGCTCACG CTATTTATTG TCACTACACT GAATTTATTT TTGTGTTTGC CAGCTCCAGC TAAAGCTGCT ACTCACAAGA GTAGCAAACT TCAAACCATG CAAACTCATA GTAAATCTAA GAACCAAATG TCTGTGTTAC TTGGTAAGGC AGAACAGCTA AACCTGCTAT ATGACAAGTA CTGGGATGAT TCAATGAGGC TCAATCCCCT ACAGGCTACA TTGCAAGGAG ATGCTTATCA TGGAGATAGA ATGCCCAATT TCCTGTCGGC TGAGTTCCGG AAGCAGCACC ACGATTTCAT CGAGAAATGG TTGAAGATGG TTGAGATGGT CGGGGCGGAT GGACTAGATG GACAGGCATT TATCAGCTAC CAGATCTTCG TGCGTGATGC ACGTAACTCG TTGCAAGCCG AGCGTTATCC GAACTGGATG TTGCCAATTA ATCAGTTTTA CAACATCGCT AATGTGGCAG TAGTTCTTGG CTCTGGTAAT GGTGCGCAAC CATTCAATAC CGTGCAGGAT TATGACAACT GGGCACATCG CTCACTAGGC ATTCCTGCGT TGTTCAATCA AGCCATTGTG AATATGCGTC TAGGTATGAA ATCTGGTGTA GTTCAGCCGA AAGTGTTAAT GGAAAAGGTG ATTCCGCAGT TGGATTCTAT TATCAAGCCA ACTGCGGAAG AAACGTTGTT CTGGGTGCCC ATCCGTAATA TGTCTGTCTC CTTTTCAAAG GAGAACCGGC AACGTATTAC TGCTGAATAT AAAAGTATTA TTGAGTATCG GTTGCTACCT GCTTACAGAG CACTACGTAA TTTTATTGCC ACTGAATATC TTCCAGTGTG TCGTGATAGT GTTGGCTTGA GTGCATTACC TGGTGGTGCG TCTTGGTATG CATATACAGT GCGTCAAAGC ACTACGACGA ACATGACCCC AGAACAGATT CATCAGCTTG GCTTGAAAGA AGTAGCGCGA TTACAGGCTG AAATTCAGTC AGTGATGCGT CAGCTCAATT TCAATGGTTC TATGCAGAAG TTCTTCAGTT TCATGCAGAA TAATGAGTAT TTTACCTTTG GTAGTGAGAA AGAGATGCTT GCTTATTACC GTGATCTCAG AACACGTGTG GAGGCACGGG TGCCAGCTTT ATTTTCGCTC GTGCCAAAAG CTGGTTTTGA AATTCTTCCG GTAGAAGCAT TCCGTGCACC TTCAGCAGCA GCTGGTTCGT ATATGCCACC GTCTAGTAAT AGACGCCATA ACGGTGTGTT CTACGCTAAT ACTAATGATT TGTCTTCCCG TCGTACTTGG AATGCAGAAA AGCTTTTTCT GCATCAAGGA ATTCCTGGAT ATCATTTTCA GTTAGGATTG CAACAGGAAT TGCGTAATCT CCCTAAGTTC CGTCGATTAG GTGGTGAGAC TGCATTCATT GAAGGATGGG GTTTATATGC TGAATCTCTT GGTAAGGAAC TCGGACTTTA CCAAGATGCA TACAACTATT TCGGTTACTT GCAAGATGCG CTATCGAGGG CAATTCGTTT AGTAGTCGAC ACCGGTTTAC ATACTAAAGG CTGGACTCGT GCACAAGTAG TTGACTATAT TGTAGAGAAT TCGGCAACCA GTCCTATAGA GGCTGAAGCC GAAGTTGATC GTTATATCGC TATCCCAGGT CAAGCATTAG CCTATAAGGT TGGCGAATTA AAAATCCACC AATTGCGCCA GTATGCACAA CTGGCATTAG GTCCAATGTT CGATCTACGG GAGTTCCATG CGGAAATACT GAAAGATGGT TCAGTACCGC TGGACATTCT GCAACAAAAA ATCGAACGCT GGATTGCTGT AAAACGTGTC AATATGCCAT CAATATCACA TCAAAAGTCA CGGGATCAGC GCCGTAAATC GTAG
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Protein sequence | MSSFLIRLLT LFIVTTLNLF LCLPAPAKAA THKSSKLQTM QTHSKSKNQM SVLLGKAEQL NLLYDKYWDD SMRLNPLQAT LQGDAYHGDR MPNFLSAEFR KQHHDFIEKW LKMVEMVGAD GLDGQAFISY QIFVRDARNS LQAERYPNWM LPINQFYNIA NVAVVLGSGN GAQPFNTVQD YDNWAHRSLG IPALFNQAIV NMRLGMKSGV VQPKVLMEKV IPQLDSIIKP TAEETLFWVP IRNMSVSFSK ENRQRITAEY KSIIEYRLLP AYRALRNFIA TEYLPVCRDS VGLSALPGGA SWYAYTVRQS TTTNMTPEQI HQLGLKEVAR LQAEIQSVMR QLNFNGSMQK FFSFMQNNEY FTFGSEKEML AYYRDLRTRV EARVPALFSL VPKAGFEILP VEAFRAPSAA AGSYMPPSSN RRHNGVFYAN TNDLSSRRTW NAEKLFLHQG IPGYHFQLGL QQELRNLPKF RRLGGETAFI EGWGLYAESL GKELGLYQDA YNYFGYLQDA LSRAIRLVVD TGLHTKGWTR AQVVDYIVEN SATSPIEAEA EVDRYIAIPG QALAYKVGEL KIHQLRQYAQ LALGPMFDLR EFHAEILKDG SVPLDILQQK IERWIAVKRV NMPSISHQKS RDQRRKS
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