Gene Xfasm12_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0140 
SymbolanmK 
ID6121125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp165344 
End bp166489 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content57% 
IMG OID641648223 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001774807 
Protein GI170729374 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00515473 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGC ATGATGATCA CTGCAATCCA AATCCAGCTC CTCTCTACCT CGGTCTCATG 
TCCGGCACCA GCATCGACGG CATCGACGCA GCGTTGGTAC GGATTAACGC AAACCCGATA
ACACATTGTG AGCTGATTGC CGCGCAAACC TCCGCTTGGG ACCCTAACCT ACGCACGACA
TTGTTGGAAC TAAGTCAAGG TCAGAACACA GCATCCCTTG ACCAACTAGG CTGGCTCGAC
GCCCAAGTCG GACTGGCCTT CGCCACAGCC GCTAATACAC TGATCGCAAA AACGGGCATA
AAGCACACAC AGATACGTGC GATTGGCTGT CATGGCCAGA CCATACGCCA TCGCCCACAC
GGCGATCTAC CCTTCACTTG GCAATTAGGC GATGCCCACC GGATCGCCGA ACTCACTGGA
ATCACTACCG TCGCAGACTT CCGCCGCCGT GACGTGGCTG CCGGCGGCCA AGGCGCACCA
CTCATGCCCG CTTTCCATCT AGCGATCCTT GGATCCGCCA ATGAAAACCG AGCAGTGCTG
AACTTAGGCG GGATTGCAAA CTTGACACTG ATCCCGATGA CCGGCCCAGT ACTCGGCTTC
GACACCGGAC CAGCGAACGC ACTGCTCGAC AGCTGGTATC AACGCCATCA TCACGAGACA
TTCGATCAAA GCGGTAACTT CGCCGCAAGC GGCAAAATCA ACCAGAAGTT ACTGGCCTGC
CTGCTAGACG ACCCTTGGTT CACCCTCCCA CCTCCCAAAA GCACAGGGCG CGAACAATTC
CATTTGGACT GGATGACCAA ACAACTAGAA CCTACACCAC CATCACCAGC CGATGTGCAG
GCAACACTGC TCGAACTGAC CGCAGTCACC GTAGCAGATG CCCTACTACG CCAACAACCC
AAGACGACTC GGCTACTGAT ATGCGGTGGC GGTGCGCATA ACCCAGTATT GATGGCACGC
CTGGCCGCAC ACCTACCCAA CGTAACAGTG GAATCGATTC AAACCTATGG ACTCAATCCG
GACTATCTGG AAGCAATGGG GTTTGCTTGG CTGGCCGCAC AAACACTGGA CGGCCAACCA
AGTAACCTGC CAAGCGTCAC TGGCGCACGC GGCCTGCGTT TGCTCGGCGC AATCCACCCA
GCCTGA
 
Protein sequence
MPVHDDHCNP NPAPLYLGLM SGTSIDGIDA ALVRINANPI THCELIAAQT SAWDPNLRTT 
LLELSQGQNT ASLDQLGWLD AQVGLAFATA ANTLIAKTGI KHTQIRAIGC HGQTIRHRPH
GDLPFTWQLG DAHRIAELTG ITTVADFRRR DVAAGGQGAP LMPAFHLAIL GSANENRAVL
NLGGIANLTL IPMTGPVLGF DTGPANALLD SWYQRHHHET FDQSGNFAAS GKINQKLLAC
LLDDPWFTLP PPKSTGREQF HLDWMTKQLE PTPPSPADVQ ATLLELTAVT VADALLRQQP
KTTRLLICGG GAHNPVLMAR LAAHLPNVTV ESIQTYGLNP DYLEAMGFAW LAAQTLDGQP
SNLPSVTGAR GLRLLGAIHP A