Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0133 |
Symbol | |
ID | 6119844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 157056 |
End bp | 157871 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641648217 |
Product | cysteine protease |
Protein accession | YP_001774801 |
Protein GI | 170729368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4870] Cysteine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACTG TCTTGAAAAG AAGAAAAAAA TCAGGATATG GCTATATCCC AGATATGGCT GATATTCGTG ACTTTTCATA CACCCCAGAG AAATCTGTCA TAGCTGCATT ACCACCTAAA GTTGATTTAA CCCCACCTTT TCAAGTTTAC GATCAAGGGC GGATCGGTTC ATGTACTGCC AATGCTCTTG CTGCCGCAAT TCAATTTGAA CGCATCCATG ACAAGCAGTC ACCTGAATTC ATTCCATCAC GACTATTCAT TTATTATAAT GAAAGAAAAA TTGAAGGCCA CGTTAACTAT GATTCTGGGG CGATGATCCG CGATGGTATC AAAGTCCTCC ATAAACTTGG GGTATGCCCG GAAAAGGAAT GGCCCTACGG CGATACACCT GCAGATCCGA GAACCGAGGA ATTTCCACCT GGAGCTCCAG CAAGTAAAAA ACCGTCAGAT CAATGTTACA AGGATGCTCA AAACTACAAA ATCACCGAAT ATAGTAGAGT GGCTCAACAT ATTGATCACC TTAAAGCTTG CCTCGCTGCA GGTTCACCAT TTGTATTCGG TTTTTCAGTG TATAACAGTT GGGTAGGCAA TAACTCGCTC CCAGTTAGAA TCCCATTACC AACCAAAAAC GATACGCTTG AAGGTGGACA TGCCGTCTTG TGTGTCGGAT ATGATGATGA AATAAGACAC TTTCGTATCC GTAATTCATG GGGAAACAAC GTCGGAGAAA ACGGCTACTT CTGGATGCCT TATGAATACA TCAGCAATAC ACAATTGGCT GATGACTTTT GGGTGATTAA GACCGTCAGA AAATAA
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Protein sequence | MHTVLKRRKK SGYGYIPDMA DIRDFSYTPE KSVIAALPPK VDLTPPFQVY DQGRIGSCTA NALAAAIQFE RIHDKQSPEF IPSRLFIYYN ERKIEGHVNY DSGAMIRDGI KVLHKLGVCP EKEWPYGDTP ADPRTEEFPP GAPASKKPSD QCYKDAQNYK ITEYSRVAQH IDHLKACLAA GSPFVFGFSV YNSWVGNNSL PVRIPLPTKN DTLEGGHAVL CVGYDDEIRH FRIRNSWGNN VGENGYFWMP YEYISNTQLA DDFWVIKTVR K
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