| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0110 |
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| Symbol | valS |
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| ID | 6119821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 129997 |
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| End bp | 132972 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641648195 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001774779 |
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| Protein GI | 170729346 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGT TCACCTCCAG CTATGACCCC ACCTCTTTTG AAGCGCGCTT ATACGCCGAG
TGGGAAGCTG CAGGCCACTT CAAACCATCC GGCACCGGCC AGCCCTATAC CATCCTGCTA
CCGCCACCGA ATGTCACCGG CACCCTGCAT ATGGGCCATG CCTTCCAACA AACCTTGATG
GATGCGCTGG TGCGCTATCA CCGCATGTGT GGAGATGACA CCCTATGGCA AGTGGGCACC
GACCACGCCG GTATCGCCAC CGAAATGGTA GTCAGCCGGA ATGTGATGCT CGAAGGCCGC
GGAGAAACCC GCGACTCGCT GGGCCGCGAC GGCTTTATCA ACAAAGTGTG GGAGTGGAAA
CAGCAATCCG GCGACACCAT CGAACGGCAA ATGCGCCGCC TCGGCGTCTC CGCAGACTGG
TCACGCAGCA CCTTCACCAT GGACCCGCAG CCATCAGCGG CGGTGACAGA AGCGTTTGTG
CGCTGGTACG AAGAAGGGCT GATTTACCGC GGCCAACGTC TGGTCAACTG GGACCCGGTG
CTGAAAACCG CCATCTCTGA TCTGGAAGTG GAGAATGTCG CAGAGGAAGG CATGCTATGG
TCGATCCGCT ATCCACTGAG CGACGGTGTC ACCTACGAAC ACATTGAGCA TGATGCCGCA
GGGAATGAAA TCCTGCGCGA GACCCGCGAC TCCCTCATCG TAGCCACCAC CCGTCCGGAA
ACCCTGCTCG GCGACACCGC GGTGATGGTG CATCCTGAAG ACCGGCGCTA CACCGCATTG
ATCGGTAAAA CCGTGACATT GCCGCTGACC GGACGCCAGG TCGAAGTGAT CAGCGACACC
TGCGTAGATC CCACATTCGG CAGCGGTGTC GTCAAAGTCA CTCCAGCGCA TGACTTCAAC
GACTTTGAAG TTGGTGTGCG ACACCAATTA CCAATGATCA AAGTGCTCGA CGATGCCGCC
TGCATTCTCT CCGAGACATA CGCCCAAGGT TGGATGACCC CTCTAAACAA CCCAAAAGGA
GATAGTCGCT GGATCAATAT CATTGATATT CCGGAGAGCG AGTTTGTCAT ACCAGCACAT
CTGGCGGGCC TGGACCGCTA CGAAGCACGC AAGCAGATAC TGGCCGATTT GGACACACAA
GGCCTGCTCG TCGCGGCGAT ACCACATACC TTGCAAGTGC CGCGTGGCGA CCGAACCGGC
CAGGTAATTG AACCCTATCT CACTGCACAG TGGTTTGTGA GGATGGATAG GCTCGCCGCA
CGCGGATTGG AACTGGTCGA GCGCGGCGCT GTGAGATTTG TTCCGCCAAA CTGGATCAAC
ACCTACCGCC ATTGGATGAA TAACATCCGA GACTGGTGCA TCAGCCGCCA ACTGTGGTGG
GGCCACCGTA TCCCGGCCTG GTTCGACGAG TATGATGGAT CATTCTACGT TGGTCGCAGT
GAAGCAGAGG TCCGTGCCAA ACACGCCCTC GGCCCCGAAG TGACGCTCAC GCAAGACAGC
AATGTGCTGG AAACCTGGTT CTCCTCGCAA CTGTGGCCCT TCTCCACCCT GGGGTGGCCC
GATCCAACGG CCATGGCCGA ACGCGGCTTT GAACGCTATC TGCCTTCATC GGTTTTGGTC
ACCGGATTCG ACATTATTTT CTTCTGGGTG GCCCGCATGA TCATGGCCAC CGACCATTTC
ACCGGAAACG TGCCATTCCA CGATGTGTAC ATCACTGGTC TGATTCGCGA TGCCCAAGGC
CAGAAAATGT CCAAATCCAA AGGCAACGTG CTCGACCCGC TGGACATCAT CGACGGCATT
ACCTTGGATG ACCTGGTCGC CAAGCGCACC ACCGGACTGA TGCAACCCAA GCTTGCCGAA
AAAATCGCCA AAGCCACACG CAAAGAATTT CCTGACGGCA TCGCCCCGCA CGGGGCCGAT
GCGTTGCGCT TCACCATCGC GGCACTAGCA ACCCACGGGC GCGATATTAA ATTCGACCTT
GGCCGCGCCG AAGGGTACAA AAACTTCTGC AACAAACTGT GGAACGCCAC CCGTTTTGTG
CTGATGAACA CCGCCGACGA CACCGCCCAC TCACCCGCGC AACACCAAGC GGGCCAAGAC
GGGCAGGACG CACCCCGCAC CCCGCAACCG CGCACCGACG CCGAACAATG GATTCTGTCG
CGGCTGGCCG CCGTCACCGC AGAAGCACAT GCGCAATTTG CCGCCTACCG CTTCGATTTA
TTGGCGCAGG CCTTGTACGA ATTTGCGTGG AACGAATTTT GTGATTGGTT CGTCGAACTG
GCCAAACCCG CACTCAATGG CAATGACACC CAGGCCGCCG CCAGCACCCG TCACACCCTG
CTGTACGTGT TAGAAACCCT GCTGCGTCTG CTGCATCCAC TCATCCCGTT TATCACGGAA
GAACTCTGGC GCCAGGTGGC GCCACGCCTG GGCATCCAAG CAACAACGCT GATGCTGCGC
CCCTATCCAC AGCCACAGCA GCTAGAGACC GCGGCCTTCG CCAACGCCGC CGCCGATGTT
GAATGGCTAA AAATCATGGT CAGCGCATTG CGCCGGATAC GCAGCACCCT CAACGTGCCA
CCTTCGCGGC GCATCTCCCT GCTGCTCCAA GGAGGCCAGG AGGTTGACCG GCATCGTATC
ACGCATTTCG CCATTGCATT GCACTTTTTG CTCAAACTCG AACACATCGA CTGGCTGAGC
GCCGCGACCG CCGCCCCTCC GTCCGCGATA GCCATCGTTG GCAGCTTAAA ACTACTGGTG
CCGCTGGAAG GTTTGATTGA TGTGGACGCC GAACGCGCGC GCCTGGATAA AGAAATCAAA
CGTGTCGAAA GCGAAATCGA TAAAAGCAAC GGGAAATTGA GTAACGCCGT CTTTGTGCAA
AACGCCCCTA CGGCGGTGGT GGAGCAAGAA CGCAGCCGCC TCACGGAGTG GACGACACAA
CTCAACGGGC TACGCGAACG ACGCACCACA CTATGA
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| Protein sequence | MSQFTSSYDP TSFEARLYAE WEAAGHFKPS GTGQPYTILL PPPNVTGTLH MGHAFQQTLM
DALVRYHRMC GDDTLWQVGT DHAGIATEMV VSRNVMLEGR GETRDSLGRD GFINKVWEWK
QQSGDTIERQ MRRLGVSADW SRSTFTMDPQ PSAAVTEAFV RWYEEGLIYR GQRLVNWDPV
LKTAISDLEV ENVAEEGMLW SIRYPLSDGV TYEHIEHDAA GNEILRETRD SLIVATTRPE
TLLGDTAVMV HPEDRRYTAL IGKTVTLPLT GRQVEVISDT CVDPTFGSGV VKVTPAHDFN
DFEVGVRHQL PMIKVLDDAA CILSETYAQG WMTPLNNPKG DSRWINIIDI PESEFVIPAH
LAGLDRYEAR KQILADLDTQ GLLVAAIPHT LQVPRGDRTG QVIEPYLTAQ WFVRMDRLAA
RGLELVERGA VRFVPPNWIN TYRHWMNNIR DWCISRQLWW GHRIPAWFDE YDGSFYVGRS
EAEVRAKHAL GPEVTLTQDS NVLETWFSSQ LWPFSTLGWP DPTAMAERGF ERYLPSSVLV
TGFDIIFFWV ARMIMATDHF TGNVPFHDVY ITGLIRDAQG QKMSKSKGNV LDPLDIIDGI
TLDDLVAKRT TGLMQPKLAE KIAKATRKEF PDGIAPHGAD ALRFTIAALA THGRDIKFDL
GRAEGYKNFC NKLWNATRFV LMNTADDTAH SPAQHQAGQD GQDAPRTPQP RTDAEQWILS
RLAAVTAEAH AQFAAYRFDL LAQALYEFAW NEFCDWFVEL AKPALNGNDT QAAASTRHTL
LYVLETLLRL LHPLIPFITE ELWRQVAPRL GIQATTLMLR PYPQPQQLET AAFANAAADV
EWLKIMVSAL RRIRSTLNVP PSRRISLLLQ GGQEVDRHRI THFAIALHFL LKLEHIDWLS
AATAAPPSAI AIVGSLKLLV PLEGLIDVDA ERARLDKEIK RVESEIDKSN GKLSNAVFVQ
NAPTAVVEQE RSRLTEWTTQ LNGLRERRTT L
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