Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0104 |
Symbol | |
ID | 6119815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 122867 |
End bp | 124891 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641648189 |
Product | oligopeptidase A |
Protein accession | YP_001774773 |
Protein GI | 170729340 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACC CACTCCTCGA TTTCTCAGAC CTTCCTCGCT TCGACGCGAT CCTCCCTGAA CACGTTGGCC CGGCCATTGA GCAGTTGCTC GCAGAGGCGG AGGCAGCCGT CGCCCACGCG GAACAGGTAA CGCCTGTGAC ATGGGAGAAC TTCGTAGTAC CGCTGGACGA TACCACAGAG CGGTTGTATC GCGCATGGGG CCAGGTGGCG CATTTGGAGG CGGTGGTCAA CACGCCGGCG CTGCGTGAGG CGTATAACGT CACTCTCCCG AAAGTCACTC GATTCAGCAG TACGCTCGGA CAGAACCTGG CGCTGTATGC GCAGTACAAA GCATTAGCGT GTGCGCCGGA ATGGGACCGT GATAACGCAG TACGGTGCAA GGTTGTTGAT AACGCTTTGC GTGATTTCCG TCTCGGCGGT GCCGAGCTGG ATGCCGCCGG GAAAGTCCGT CTGGCAGAGA TCAAGCAGGA GCTGTCGGCA TTGTCTGCAA CGTTTTCGCA AAATGTGCTT GATGCAACAG AGGCATGGTC CTACACCACC GAAGCCGCCG CTGTGTTATC CGGTCTGCCG ACAGAGACTG TCGCTACCGC GCGGGCGGCC GCAGAAAAGA AGGGGGTATC AGGCTGGACG TTCACGTTAC AGATGCCCTG CTATCTGTCG GTCCAAAGCG ATGCTGACAA CCGCGCGTTA CGAGAGCGCT CATATCATGC TAGTGCGATA CGCGCTTCGG AATTTGGCGA TGCCGCGTTG GATAATAGTC CGCACATTCA TCAGATTCTC ACGCTGCGTT CCGAATTGGC AGCGCTGCTT GGTTTCTCCT GTTACGCGGC ATACTCGGTC GCAACCAAGA TGGCAGAGGA TCCGGCTGAG GTACTCAGCT TCCTGCATGA CTTGGCAGGA CGTGCCAAGC CGCATGCTCA ACGTGATCGC CGTGAACTGG AAACGTTCGC ATGCGAGGCG CTGGGGCTTG AGACGCTGGA AGCCTGGGAC ATTGCATATG CCAGCGAGAA GCTCAAACAA GCCCGTTACA GTTTCTCCGA GCAGGAAGTA AAGCAGTATT TCACCGAACC CAAGGTCCTG GCTGGGTTGT TCGAGGTGAT CCACTCCCTT TATGGACTGT GGATCGAAGA AGACGCCGCG CCGGTCTGGC ATCCAGATGT TCGCTTCTAC CGTCTCATTG ATATGAATGG GCAACGCGTC GGCCAGTTTT ATCTGGATCT GTATGCACGG GAGGGCAAGC GCGGCGGGGC ATGGATGGAT GATTGCCGTA ACCGCCGTGA CAAAAGCGAT GGGGTGCAAA CTCCTGTGGT CTATTTGGTG TGCAATTTCG GCCGTGGTAA CGACGGTGTG CTCCCTACGT TCCGTCATCA GGAGGTCATT ACTTTATTTC ACGAAATGGG CCATGGACTG CATCAGTTAC TGACCCGGAT TGGGGAACTG GGCGTGGCTG GTATTAATGG TGTGGAATGG GATGCGGTGG AGTTGCCCAG TCAGTTCATG GAAAACTTTT GCTGGGAGTG GGAGCGCGTT CAAACCATGA CAGCACACGT GGAGACCGGT GCACCGCTGC CACGCAGTCT GTTCGATCGG ATGGTCTGCG CGCGCAATTT TCAGAGCGGA ATGTTCACCG TGCGCCAACT TGAGTTCGCG CTATTCGACA TGCTGCTACA TAGTGACTTC GATCCAGCAC AGGACAGCGT ACTGGGGCTG TTAGAACGCG TCCGTGATGA AGTGGCCGTC AACCGGTTAC CGGACTGGAA TCGTTTTCCG CACCAGTTCA GACATATTTT TGCTGGTGGT TATGCAGCGG GATACTACAG TTATAAATGG GCCGAAGTCC TCAGCGCAGA CGCTTATGCT GCATTTGAAG AGGCTCCGGA TCAATTTGCC GAAATAGGGG CGCGCTTTCT CGACGAAATC CTAAGTCGTG GCGGCAGTCG CAGCGCAGCA GATAATTTCC AGGCCTTCCG CAAACGCGCG CCTCGCATTG ATGCCTTGCT GAAGCGCAAC GGGATGACAG AATAG
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Protein sequence | MSNPLLDFSD LPRFDAILPE HVGPAIEQLL AEAEAAVAHA EQVTPVTWEN FVVPLDDTTE RLYRAWGQVA HLEAVVNTPA LREAYNVTLP KVTRFSSTLG QNLALYAQYK ALACAPEWDR DNAVRCKVVD NALRDFRLGG AELDAAGKVR LAEIKQELSA LSATFSQNVL DATEAWSYTT EAAAVLSGLP TETVATARAA AEKKGVSGWT FTLQMPCYLS VQSDADNRAL RERSYHASAI RASEFGDAAL DNSPHIHQIL TLRSELAALL GFSCYAAYSV ATKMAEDPAE VLSFLHDLAG RAKPHAQRDR RELETFACEA LGLETLEAWD IAYASEKLKQ ARYSFSEQEV KQYFTEPKVL AGLFEVIHSL YGLWIEEDAA PVWHPDVRFY RLIDMNGQRV GQFYLDLYAR EGKRGGAWMD DCRNRRDKSD GVQTPVVYLV CNFGRGNDGV LPTFRHQEVI TLFHEMGHGL HQLLTRIGEL GVAGINGVEW DAVELPSQFM ENFCWEWERV QTMTAHVETG APLPRSLFDR MVCARNFQSG MFTVRQLEFA LFDMLLHSDF DPAQDSVLGL LERVRDEVAV NRLPDWNRFP HQFRHIFAGG YAAGYYSYKW AEVLSADAYA AFEEAPDQFA EIGARFLDEI LSRGGSRSAA DNFQAFRKRA PRIDALLKRN GMTE
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