| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0088 |
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| Symbol | rimM |
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| ID | 6119798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 104584 |
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| End bp | 105096 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641648173 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001774758 |
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| Protein GI | 170729325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA ATGAGCGCCG TATCCTGCTA GGAAGGGTTG TAGGTGGTTT CGGCTTGCGT
GGTGAAATCA AGATGGAGTC TTGGACTGAG CCACGGGATG CGATCTTCCG TTACCAGCCG
TGGTTACTAC GTTCTCCTAC GGGTACCGAG TCCATGTTGA ATGGTGCCCG TGGCTACGAC
ACTGGCAAGC GTTTGATTGC AACCTTTCCT GGCATCAATG ATCGTAATGC AGTCGAAGCG
ATCTGTGGTA CGGAAATCTA TGTGCCACGC AGCGCCTTGC CTCCACCTCA CCCCGACGAG
TATTACTGGG TCGATTTGGA AGGGCTGCAA GTACACACCC TTGAAGGTGT GGTTCTCGGT
AGCGTTTCCC ATCTGTTTTC CAACGGCGCC AATGATGTGG TAGTCATCCA TGGCGAGCGC
GAGCGCTTGA TCCCGTTTGT ACAGCCTGAT TACGTGAAGT CGGTTGATTT TGAGGCTGAG
CGTATTGTTG TCGATTGGGA TCCTGAGTTC TGA
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| Protein sequence | MKDNERRILL GRVVGGFGLR GEIKMESWTE PRDAIFRYQP WLLRSPTGTE SMLNGARGYD
TGKRLIATFP GINDRNAVEA ICGTEIYVPR SALPPPHPDE YYWVDLEGLQ VHTLEGVVLG
SVSHLFSNGA NDVVVIHGER ERLIPFVQPD YVKSVDFEAE RIVVDWDPEF
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